FRSE, FRSC, CChem, BA Hons (Cantab), PhD (Dublin), ScD (Cantab)
Chair in Chemistry
- About
-
- Email Address
- m.jaspars@abdn.ac.uk
- Telephone Number
- +44 (0)1224 272895
- Office Address
Meston Building Room G21
- School/Department
- School of Natural and Computing Sciences
Biography
Previous Positions
- Head of the Department of Chemistry, University of Aberdeen 2016-2019
- Scientific Project Leader of the EU FP7 Project ‘PharmaSea’ (€ 9.5 M, 24 partners from 14 countries) 2012-2017
- Visiting Professor for Senior International Scientists of the Chinese Academy of Sciences 2012-2013
- Visiting Professor (20%) at the University of Tromsø, Norway to provide advice for their £14 M marine biodiscovery programme. 2007-2017
- Sabbatical at the Australian Institute of Marine Science, 2004
- Professor of Organic Chemistry, University of Aberdeen, 2003-
- Senior Lecturer in Organic Chemistry, University of Aberdeen, 2000-2003
- Lecturer in Organic Chemistry, University of Aberdeen, 1995-2000
- Post-Doc, Crews Lab, University of California, Santa Cruz, 1993-1995
- Post-Doc, Burgess Lab, Texas A & M University, 1992-1993
Qualifications
- BA Hons (Cantab) Natural Sciences (Chemistry)1987 - University of Cambridge
- PhD Organic Chemistry1992 - Trinity College, DublinElectrophilic Catalysis of the Sakurai Reaction
- ScD (Cantab) Organic Chemistry2018 - University of CambridgeInvestigating the Chemical Structures, Bioactivity and Biosynthesis of Marine and Desert Natural Products
External Memberships
On the Scientific Advisory Board of the Center for Microbial Secondary Metabolites, Danish Technical University, Copenhagen, Denmark 2018-
Management board of NPRONET, a BBSRC network in industrial biotechnology and biosciences. 2014-2018
Governing board member of Industrial Biotechnology Innovation Centre, Strathclyde 2014-2016
Policy Work:
Contributing author to “Science in Small Island Developing States: Capacity Challenges and Options relating to Marine Genetic Resources of Areas Beyond National Jurisdiction”
Co-author of Blue Paper on the Ocean Genome for the High Level Panel for a Sustainable Ocean Economy 2020
Co-author of study for the United Nations Convention on Biological Diversity on Digital Sequence Information on Genetic Resources: Concept, Scope and Current Use. CBD/DSI/AHTEG/2020/1/3 2020
Special advisor on Marine Genetic Resources to the International Union for the Conservation of Nature at the United Nations process on the Conservation and Sustainable Use of Biodiversity of Areas Beyond National Jurisdiction. Member of the Member of the IUCN World Council on Protected Areas 2019-
Co-lead of the Deep Sea Genetic Resources Working Group of the Deep Ocean Stewardship Initiative. 2018-
Member of Royal Society working group writing a policy briefing for the Government Office of Science entitled “Future Ocean Resources: Metal-Rich Minerals and Genetics” Released July 2017.
Chair of advisory panel of policy and legal experts (Part of the PharmaSea EU FP7 consortium lead by Marcel Jaspars 2012-17) bringing together policymakers (United Nations, European Commission) with NGOs (International Union for the Conservation of Nature, Convention on Biodiversity Secretariat, International Seabed Authority) with international marine biotechnology companies and academic and legal/policy experts to shape the policy debate on intellectual property derived from marine genetic resources in areas beyond national jurisdiction (United Nations process on the Conservation and Sustainable Use of Biodiversity of Areas Beyond National Jurisdiction). Contributions recorded on our BBNJ Page and our Song of the Ocean page
UK member of the Marine Biotechnology working group of the European Science Foundation’s Marine Board Marine Biotechnology Working Group to assist in the revision of the White Paper “Marine Biotechnology – A European Strategy” 2009-2010
Prizes and Awards
Biotechnology and Biological Sciences Research Council Research Development Fellow, 2006-2009
American Society of Pharmacognosy Matt Suffness Award for young investigators, 2003
Fellow of the Royal Society of Chemistry, Chartered Chemist
Fellow of the Royal Society of Edinburgh
Fellow of the Higher Education Academy
- Research
-
Research Overview
Tour the lab and find out what we do
Introduction:
My research involves the discovery of new compounds with potential pharmaceutical use from marine and desert environments, their structure determination and biosynthesis. Translation of bioactive natural compounds into preclinical evaluation is exemplified by with sponge derived compounds/analogues that have activity in animal models for Alzheimer’s disease or epilepsy or are able to deliver proteins into animal brains to generate a model of Alzheimer’s disease.
Natural Product Structure Determination:
Structural work involves the use of complementary NMR and theoretical methods to solve the relative stereochemistry of complex natural products, particularly the use of NOE data to constrain conformational searches and the comparison of predicted and experimental CD spectra. A combination of analytical and spectroscopic methods was used to define a metal complex present in the extract of a seasquirt, giving insight into its ecological role.Together with Leo Gross at IBM Research, I started original work on organic structure determination using a combination of spectroscopy and atomic force microscopy (AFM). First we showed how Ångstrom-resolution AFM images may be used to solve the structure of a simple planar molecule and how this process might be generalised. Subsequently we applied the combined methods to an unknown molecule with a NMR silent region (no H atoms). In a book chapter, we propose the developments needed so that AFM may become invaluable in the rapid structure determination of complex organic molecules in the future.
Biosynthesis:
The isolation and structural characterisation of modified cyclic peptides of marine origin was driven by an interest in their chemical structure in solution and their interaction with metal ions. A major problem with these bioactive cyclic compounds was a sustainable supply. In 2004, I worked together with Dr Paul Long at the London School of Pharmacy and scientists from the Australian Institute of Marine Science to effect the first shotgun cloning of the patellamide biosynthetic pathway resulting in low level production of these compounds.Subsequent collaboration with Professor Jim Naismith at St Andrews succeeded in overexpressing and structurally characterising the main enzymes involved in the biosynthesis of the patellamides and related cyanobactins. Working together, we defined the main proteases involved including the macrocyclase that circularises a linear peptide without inclusion of a signal sequence, thus making it a very exciting prospect for biotechnological application. We have defined a unique enzyme that forms the heterocycles – the first crystal structure of this type of enzyme. Engineering of this enzyme allowed short synthetic peptide sequences to be processed to form heterocycles in the chain. These enzymes are extremely permissive, and natural and non-natural substrates can be processed using them resulting in the formation milligram quantities of complex, modified cyclic peptides. The starting sequences may include non-natural amino acids and even non-amino acid segments such as fatty acids, aromatics and sugars, with a minimum of three residues required for this to work.
Research Areas
Chemistry
Research Specialisms
- Marine Chemistry
- Medicinal Chemistry
- Organic Chemistry
- Analytical Chemistry
- Applied Chemistry
Our research specialisms are based on the Higher Education Classification of Subjects (HECoS) which is HESA open data, published under the Creative Commons Attribution 4.0 International licence.
MARBLES EU Project
Harnessing marine microbes for drug discovery and sustainable production of fish and crops
Knowledge Exchange
Policy Work:
Protecting the Oceans Using Chemistry
Professor Marcel Jaspars has been advising the UN to develop a new law to protect marine biodiversity. The UN is working to conserve and sustainably use marine biodiversity in areas beyond national jurisdiction – about 60% of the oceans and 40% of the entire planet. The Song of the Oceans brings together science, the arts and humanities to publicise the urgent need to conserve the oceans.
Policy Input
Marcel provided scientific leadership for a large EU FP7 consortium ‘PharmaSea’, running from 2012-2017 with the contribution of 24 partners from 14 countries. Part of this project was to engage with stakeholders, NGOs and policy makers to provide sound scientific advice on major issues affecting the conservation and sustainable use of marine biodiversity. His major role was to translate scientific information and provide options on this topic to senior policy makers at the EU and UN, making visits to Brussels and New York to present information in a digestible format and answer questions, paying particular attention to the legal and policy requirements.
Marcel has been active at national and international levels to develop the science, its applications/industrial uptake and associated policy involved in marine biodiscovery and biotechnology. Since 2014 Marcel has been involved in the BBNJ process, providing scientific input and co-authoring the Mare Geneticum proposal which provides building blocks based on good scientific practice towards a solution for the MGR aspects of the BBNJ process. Also see our work to bring this to a wider audience with our 'Song of the Oceans'.
At EU level he was involved in coordinating the authoring the health section of a European Science Foundation position paper on the Future of Marine Biotechnology informing the blue growth agenda of the European Commission through a number of concrete and measurable recommendations. In 2017 he was a member of the UK Marine Foresight Committee’s Royal Society Working group that wrote a report entitled ‘Future Ocean Resources: Metal-Rich Minerals and Genetics’ on the UN BBNJ issue and he has since provided advice on this topic to the UK’s Foreign and Commonwealth Office. More recently he was a co-author on a report on the Ocean Genome for the High Level Panel for a Sustainable Ocean Economy and a lead author on a study for the United Nations Convention on Biological Diversity on Digital Sequence Information on Genetic Resources: Scope, Concept and Current Use.
Marcel Jaspars speaking at UN HQ in New York as advisor to the International Union for the Conservation of Nature at the Second Intergovernmental Conference on the UN process on the Conservation and Sustainable Use of Biodiversity in Areas Beyond National Jurisdiction
Funding and Grants
Grants in the last 5 years
05/2021
EU Horizon 2020
£561 K
MARBLES Project
08/2021
IBIOIC BBSRC DTP
£102 K
Downstream processing and structure confirmation of chemoenzymatically produced macrocycles
10/2021
EASTBio BBSRC DTP
£97 K
The role of sponge competition in cold-water coral reefs – ROV video analyses and secondary metabolite profiling in the search for compounds of medical and ecological relevance
10/2021
Commonwealth Scholarship Commission
£107 K
PhD scholarship
08/2022
DEFRA
£217 K
DEEPEND project
11/2022
EU Horizon Europe
£553 K
BlueRemediomics Project
01/2023
EU Horizon Europe
£265 K
HOTBIO Doctoral Training Network
04/2023
DEFRA
£166 K
DEEPEND 2 Project
- Teaching
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Courses
Non-course Teaching Responsibilities
Professor Jaspars is:
Year 3 Coordinator
Erasmus Officer for Chemistry
Coordinator for SX3002 'Science and Society'
- Publications
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Page 4 of 6 Results 151 to 200 of 272
The mechanism of patellamide macrocyclization revealed by the characterization of the PatG macrocyclase domain
Nature Structural & Molecular Biology, vol. 19, no. 8, pp. 767-772Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1038/nsmb.2340
Fluorine speciation analysis using reverse phase liquid chromatography coupled off-line to continuum source molecular absorption spectrometry (CS-MAS): identification and quantification of novel fluorinated organic compounds in environmental and biological samples
Analytical Chemistry, vol. 84, no. 14, pp. 6213-6219Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/ac301201y
Antimicrobial antioxidant daucane sesquiterpenes from Ferula hermonis Boiss
Phytotherapy Research, vol. 26, no. 4, pp. 579-586Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/ptr.3609
- [ONLINE] View publication in Scopus
Defence response of Sitka spruce before and after artificial inoculation with Heterobasidion annosum: 1H NMR fingerprinting of bark and sapwood metabolites
Analytical and Bioanalytical Chemistry, vol. 402, no. 10, pp. 3333-3344Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s00216-011-5666-z
Marine metabolites and metal ion chelation
Handbook of Marine Natural Products. Springer Netherlands, pp. 861-892, 32 pagesChapters in Books, Reports and Conference Proceedings: Chapters- [ONLINE] DOI: https://doi.org/10.1007/978-90-481-3834-0_16
- [ONLINE] View publication in Scopus
Antifungal and antibacterial activity of 3-alkylpyridinium polymeric analogs of marine toxins
International Biodeterioration & Biodegradation, vol. 68, pp. 71-77Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.ibiod.2011.10.014
New nodulopeptins from Nodularia spumigena KAC 66
Tetrahedron, vol. 68, no. 5, pp. 1622-1628Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.tet.2011.11.056
- [ONLINE] View publication in Scopus
Triterpenoid saponins from Ferula hermonis Boiss
Biochemical Systematics and Ecology, vol. 40, pp. 86-90Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.bse.2011.09.006
- [ONLINE] View publication in Scopus
Contemporary strategies in natural products structure elucidation
Handbook of Marine Natural Products. Springer Netherlands, pp. 423-517, 95 pagesChapters in Books, Reports and Conference Proceedings: Chapters- [ONLINE] DOI: https://doi.org/10.1007/978-90-481-3834-0_7
- [ONLINE] View publication in Scopus
Isolation of marine natural products
Methods in Molecular Biology, vol. 864, pp. 367-392Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/978-1-61779-624-1_14
Biomedicinals from the Microbial Metagenomes of Marine Invertebrates
Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. John Wiley and Sons, pp. 517-544, 28 pagesChapters in Books, Reports and Conference Proceedings: Chapters- [ONLINE] DOI: https://doi.org/10.1002/9781118010549.ch50
- [ONLINE] View publication in Scopus
Diverse Metabolic Profiles of a Streptomyces Strain Isolated from a Hyper-arid Environment
Journal of Natural Products, vol. 74, no. 9, pp. 1965-1971Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/np200470u
Cutting the cost of HP/HT cleanups: Novel high density cleanup package enables brine reclamation and reduces costs
Chapters in Books, Reports and Conference Proceedings: Conference Proceedings- [ONLINE] View publication in Scopus
Chaxamycins A-D, Bioactive Ansamycins from a Hyper-arid Desert Streptomyces sp
Journal of Natural Products, vol. 74, no. 6, pp. 1491-1499Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/np200320u
The antibacterial ent-eusynstyelamide B and eusynstyelamides D, E, and F from the arctic bryozoan tegella cf. spitzbergensis
Journal of Natural Products, vol. 74, no. 4, pp. 837-841Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/np100499c
- [ONLINE] View publication in Scopus
Synoxazolidinone C; A bicyclic member of the synoxazolidinone family with antibacterial and anticancer activities
Tetrahedron Letters, vol. 52, no. 15, pp. 1804-1806Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.tetlet.2011.02.027
- [ONLINE] View publication in Scopus
Marine natural products targeting phospholipases A2
BIOCHEMICAL PHARMACOLOGY, vol. 80, no. 12, pp. 1793-1800Contributions to Journals: Review articles- [ONLINE] DOI: https://doi.org/10.1016/j.bcp.2010.08.024
- [ONLINE] View publication in Scopus
Photosynthetic marine organisms as a source of anticancer compounds
Phytochemistry reviews, vol. 9, no. 4, pp. 557-579Contributions to Journals: Review articles- [ONLINE] DOI: https://doi.org/10.1007/s11101-010-9200-2
- [ONLINE] View publication in Scopus
Synoxazolidinones A and B: Novel Bioactive Alkaloids from the Ascidian Synoicum pulmonaria
Organic Letters, vol. 12, no. 21, pp. 4752-4755Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/ol101707u
Azole-Based Cyclic Peptides from the Sea Squirt Lissoclinum Patella: Old Scaffolds, New Avenues
ChemBioChem, vol. 11, no. 13, pp. 1803-1815Contributions to Journals: Literature Reviews- [ONLINE] DOI: https://doi.org/10.1002/cbic.201000230
Solution Structure of the Leader Sequence of the Patellamide Precursor Peptide, PatE1–34
ChemBioChem, vol. 11, no. 13, pp. 1867-1873Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/cbic.201000305
Chemical synthesis and biological activities of 3-alkyl pyridinium polymeric analogues of marine toxins
Journal of Chemical Biology, vol. 3, no. 3, pp. 113-125Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s12154-010-0036-4
Corrigendum to “Heteronemin, a spongean sesterterpene, inhibits TNFα-induced NF-κB activation through proteasome inhibition and induces apoptotic cell death” [Biochem. Pharmacol. 79 (2010) 610–622]
Biochemical Pharmacology, vol. 79, no. 12, pp. 1837-1837Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.bcp.2010.02.021
Heteronemin, a spongean sesterterpene, inhibits TNFα-induced NF-κB activation through proteasome inhibition and induces apoptotic cell death
Biochemical Pharmacology, vol. 79, no. 4, pp. 610-622Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.bcp.2009.09.027
Dermacozines, a new phenazine family from deep-sea dermacocci isolated from a Mariana Trench sediment
Organic & Biomolecular Chemistry, vol. 8, no. 10, pp. 2352-2362Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1039/c001445a
The inhibition of TNF-α-induced NF-κB activation by marine natural products
Biochemical Pharmacology, vol. 78, no. 6, pp. 592-606Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.bcp.2009.05.009
New iodotyramine derivatives from Didemnum rubeum
Tetrahedron, vol. 65, no. 36, pp. 7482-7486Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.tet.2009.07.002
Bioactive Diterpene Derivatives from the Marine Sponge Spongionella sp.
Journal of Natural Products, vol. 72, no. 8, pp. 1471-1476Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/np900233c
Realizing the Potential of Marine Biotechnology: Challenges and Opportunities
Industrial Biotechnology, vol. 5, no. 2, pp. 77-83Contributions to Journals: Literature Reviews- [ONLINE] DOI: https://doi.org/10.1089/ind.2009.5.077
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/3205/1/Realizing_the_potential.pdf
Study of the diversity of culturable actinomycetes in the North Pacific and Caribbean coasts of Costa Rica
Antonie van Leeuwenhoek , vol. 96, no. 1, pp. 71-78Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s10482-009-9337-4
Time-Dependent DFT for Elucidation of Stereochemistry: Dermacozine E, a Natural Product from the Mariana Trench
14th ETSF Workshop on Electronic ExcitationsContributions to Conferences: PostersTime-Dependent DFT for Elucidation of Stereochemistry: Dermacozine E, a Natural Product from the Mariana Trench
42nd IUPAC CongressContributions to Conferences: PostersDensity functional theory studies of oxygen and carbonate binding to a dicopper patellamide complex
Journal of Inorganic Biochemistry, vol. 102, no. 12, pp. 2171-2178Contributions to Journals: ArticlesMarine metabolites and metal ion chelation: intact recovery and identification of an iron(II) complex in the extract of the ascidian Eudistoma gilboviride
Angewandte Chemie International Edition, vol. 47, no. 42, pp. 8090-8092Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/anie.200802060
Finding NEMO (inhibitors) the search for marine pharmacophores targeting the nuclear factor-κB
Chimica Oggi, vol. 26, no. 4, pp. 40-46Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Finding NEMO (inhibitors) the search for marine pharmacophores targeting the nuclear factor-kappa B
Chimica Oggi, vol. 26, no. 4, pp. 40-46Contributions to Journals: ArticlesNovel bioactive metabolites from a marine derived bacterium Nocardia sp. ALAA 2000
Journal of Antibiotics, vol. 61, no. 6, pp. 379-386Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1038/ja.2008.53
- [ONLINE] View publication in Scopus
Marine natural products as targeted modulators of the transcription factor NF-kappa B
Biochemical Pharmacology, vol. 75, no. 3, pp. 603-617Contributions to Journals: Editorials- [ONLINE] DOI: https://doi.org/10.1016/j.bcp.2007.07.044
Contributions of marine bioscience to industrial biotechnology
Industrial Biotechnology, vol. 3, no. 4, pp. 304-313Contributions to Journals: Literature Reviews- [ONLINE] DOI: https://doi.org/10.1089/ind.2007.3.304
NF-kappa B-inhibiting naphthopyrones from the Fijian echinoderm Comanthus parvicirrus
Journal of Natural Products, vol. 71, no. 1, pp. 106-111Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1021/np070290y
Metal-Chelation in Ascidians: The Direct Identification of a Eudistomin-Iron Complex in Eudistoma gilboviride Extract Using Parallel LC-ICPMS/ESMS
Gordon Research Conference - Marine Natural ProductsContributions to Conferences: PostersNew Heteroatomatic Compounds from the Deep
7th Joint Meeting of AFERP, ASP, GA, PSE & SIFContributions to Conferences: PostersNew heteroatomatic compounds from the deep
Planta Medica, vol. 74, no. 09, PB160Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1055/s-0028-1084504
Screening seeds of some Scottish plants for free radical scavenging activity
Phytotherapy Research, vol. 21, no. 7, pp. 615-621Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/ptr.2129
Predicting the Nature and Timing of Epimerisation on a Modular Polyketide Synthase
ChemBioChem, vol. 8, no. 1, pp. 28-31Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/cbic.200600399
Bioactivity of the extracts and isolation of lignans and a sesquiterpene from the aerial parts of Centaurea pamphylica (Asteraceae)
DARU, vol. 15, no. 3, pp. 118-122Contributions to Journals: Articles- [ONLINE] http://journals.tums.ac.ir/abs/3896
Lignans and Flavonoids from the Seeds of Centaurea bornmuelleri Hausskn. Ex. Bornm. and Centaurea huber-morathii Wagenitz
Polish Journal of Chemistry, vol. 81, no. 1, pp. 39-44Contributions to Journals: ArticlesBioactividad de los extractos y aislamiento de los lignanos de las semillas de Centaurea dealbata
Ars Pharmaceutica, vol. 47, no. 4, pp. 417-424Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Americanin, a bioactive dibenzylbutyrolactone lignan, form the seeds of Centaurea americana
Phytochemistry, vol. 67, no. 21, pp. 2370-2375Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.phytochem.2006.08.012
A pyridinium derivative from Red Sea soft corals inhibited voltage-activated potassium conductances and increased excitability of rat cultured sensory neurones
BMC Pharmacology, vol. 6, 10Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1186/1471-2210-6-10
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/3762/1/A_pyridinium_derivative.pdf