Personal Chair
- About
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- Email Address
- a.douglas@abdn.ac.uk
- Telephone Number
- +44 (0)1224 272873
- Office Address
- School/Department
- School of Medicine, Medical Sciences and Nutrition
Memberships and Affiliations
- Internal Memberships
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- Co-lead of the Medical Statistics Team
- Member of the mangement team of the Centre for Genome Enabled Biology and Medicine (CGEBM).
- Member of the Steering Committee for the High Performance Computing facility, University of Aberdeen.
- External Memberships
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- Member of BBSRC Pool of Experts
- Academic advisor British Commonwealth Scholarship Commission
- Fellow of the Royal Statistical Society
- Research Assessor for the Carnegie Trust
Prizes and Awards
University of Aberdeen Excellence Awards - Best Taught Postgraduate lecturer 2017
- Research
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Research Areas
Accepting PhDs
I am currently accepting PhDs in Biological and Environmental Sciences, Nutrition and Health, Biomedical Sciences, Applied Health Sciences.
Please get in touch if you would like to discuss your research ideas further.
Nutrition and Health
Accepting PhDsApplied Health Sciences
Accepting PhDsResearch Specialisms
- Applied Statistics
- Statistical Modelling
- Bioinformatics
- Medical Statistics
- Statistics
Our research specialisms are based on the Higher Education Classification of Subjects (HECoS) which is HESA open data, published under the Creative Commons Attribution 4.0 International licence.
Funding and Grants
The genomic landscape of adaptive radiation in the Jaera albifrons species complex . NERC. £340K.
Professor Stu Piertney (UoA) and Dr Alex Douglas.
2015 - 2017
Gut health and immune function: the emerging role of gut microbiota in sustainable aquaculture. BBSRC-NERC, £212K.
Professor Sam Martin (UoA), Dr Alex Douglas, Dr Petra Lewis (UoA), Dr Daniel Merrifield (University of Plymouth), Dr Rachel Lawrence (Royal Veterinary College), Professor Douglas Tocher (University of Stirling), Professor Simon Davies(University of Plymouth).
2015 - 2016
The health black box in PCOD. Understanding the onset of health impacts caused by disturbances. ONR, £260K.
Dr David Lusseau (UoA), Dr Alex Douglas, Professor John Speakman (UoA and Chinese Academy of Sciences), Dr Dorian Houser (National Marine Mammal Foundation, USA), Dr Patricia Fair (USDOC/NOAA/NOS/NCCOS, USA), Mark Styczynski (Georgia Institute of Technolofy, USA).
2015- 2018
Explaining niche separation in tropical forests: feedbacks between root-fungal symbioses and soil phosphorus partitioning . NERC. £521K.
Professor David Burslem
The human fetal liver: development and response to maternal drug use. MRC, £600K,
Professor P. Fowler (UoA), Dr Alex Douglas (UoA), Dr David Hay (University of Edinburgh), Professor John Iredale (University of Edinburgh), Professor P.O’shaughnessy (University of Glasgow).
- Teaching
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Teaching Responsibilities
I am Programme Coordinator for PGR Quantitative Research and Skills in the School of Biological Sciences with overall responsibility for the strategic direction, curricula development, coordination and provision of statistics teaching and training for the postgraduate community.
I also coordinate and teach multiple courses at undergraduate and postgraduate levels, in the field, in the classroom and also online. Currently I teach on:
Undergraduate
BI29Z3 'Biodiversity Field Course'
Postgraduate Taught
MSc BI5009 'Experimental Design and Analysis' (course coordinator)
MSc BI5010 'Statistics for Complex Study designs' (course coordinator)
Postgraduate Research
QUADRAT and SUPER NERC DTPs 'An Introduction to R for biologists' (course coordinator)
QUADRAT NERC DTP 'An Introduction to Linear Modelling Using R' (course coordinator)
PGR 'An Introduction to R' (course coordinator)
PGR 'An Introduction to Statistical Modelling in R' (course coordinator)
PGR ' An Introduction to Generalised Linear Modelling using R' (course coordinator)
Previous Teaching
UG BI3010 'Statistical Analysis of Biological Data' (course coordinator)
MSc BI5505 'Introduction to Bayesian Inference' (course coordinator)
MSc ZO5304 'Population and Community Ecology'
I have also written a free open access book which introduces researchers to using R for robust and reproducible research.
Non-course Teaching Responsibilities
I am a personal tutor for 16 undergraduate students
- Publications
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Genome-wide Associations Reveal Human-Mouse Genetic Convergence and Modifiers of Myogenesis, CPNE1 and STC2
American Journal of Human Genetics, vol. 105, no. 6, pp. 1222-1236Contributions to Journals: ArticlesGenetic loci regulating arsenic content in rice grains when grown flooded or under alternative wetting and drying irrigation
Rice, vol. 12, 54Contributions to Journals: Articles- [ONLINE] http://snp-seek.irri.org/
- [ONLINE] DOI: https://doi.org/10.1186/s12284-019-0307-9
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/12630/1/Genetic_loci_regulating_arsenic_content_in_rice_grains_when_grown_flooded_or_under_alternative_wetting_and_drying_irrigation.pdf
- [ONLINE] View publication in Scopus
- [ONLINE] View publication in Mendeley
Spatial Effects and GWA Mapping of Root Colonization Assessed in the Interaction Between the Rice Diversity Panel 1 and an Arbuscular Mycorrhizal Fungus
Frontiers in plant science, vol. 10, 633Contributions to Journals: ArticlesEvaluation of Early Nutritional Programming on Fish Performance, Intestinal Transcriptome and Microbiome in Atlantic Salmon (Salmo salar)
20th (Zebra)Fish Immunology and Vaccination Workshop, pp. 1Contributions to Conferences: PostersThe Effects of Graded Levels of Calorie Restriction: XIII. Global Metabolomics Screen Reveals Graded Changes in Circulating Amino Acids, Vitamins, and Bile Acids in the Plasma of C57BL/6 Mice
The Journals of Gerontology. Series A, Biological Sciences and Medical Sciences, vol. 74, no. 1, pp. 16-26Contributions to Journals: ArticlesAdaptations of energy metabolism in cetaceans have consequences for their response to foraging disruption
Working Papers: Preprint Papers- [ONLINE] DOI: https://doi.org/10.1101/709154
Genetic diversity among geographically distant isolates of Neoparamoeba perurans
Diseases of Aquatic Organisms, vol. 137, no. 2, pp. 81-87Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.3354/dao03433
Dietary Fat, but Not Protein or Carbohydrate, Regulates Energy Intake and Causes Adiposity in Mice
Cell Metabolism, vol. 28, no. 3, pp. 415-431Contributions to Journals: ArticlesGenome Wide Association mapping of grain and straw biomass traits in the rice Bengal and Assam Aus Panel (BAAP) grown under alternate wetting and drying and permanently flooded irrigation
Frontiers in plant science, vol. 9, 1223Contributions to Journals: ArticlesMicrobiome composition within a sympatric species complex of intertidal isopods (Jaera albifrons)
PloS ONE, vol. 13, no. 8, e0202212Contributions to Journals: ArticlesThe Effects of Graded Levels of Calorie Restriction: X. Transcriptomic Responses of Epididymal Adipose Tissue
The Journals of Gerontology. Series A, Biological Sciences and Medical Sciences, vol. 73, no. 3, pp. 279-288Contributions to Journals: ArticlesQuantification of ethyl glucuronide, ethyl sulfate, nicotine, and its metabolites in human fetal liver and placenta
Forensic Toxicology, vol. 36, no. 1, pp. 102-112Contributions to Journals: ArticlesPhylogenomic signatures of speciation and phylogeography in a species complex of sympatric intertidal isopods (Jaera albifrons).
Evolution 2018: Joint congress on Evolutionary BiologyContributions to Conferences: PostersEffects of algal enrichment and salinity on sediment particle reworking activity and associated nutrient generation mediated by the intertidal polychaete Hediste diversicolor
Journal of Experimental Marine Biology and Ecology, vol. 495, pp. 75-82Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.jembe.2017.06.002
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10734/2/Murray_et_al_submitted.docx
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10734/1/Fig_1.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10734/3/Fig_2.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10734/5/Fig_3.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10734/4/Fig_4.tif
Analysis of adipose tissue immune gene expression after vaccination of rainbow trout with adjuvanted bacterins reveals an association with side effects
Molecular Immunology, vol. 88, pp. 89-98Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.molimm.2017.05.026
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/2/adipose_paper_CORRECTED_v3.docx
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/7/Fig_1.pdf
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/3/Figure2.tiff
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/1/Figure3.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/4/Figure4.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/5/Figure5.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10599/6/Figure6.tiff
The effects of graded levels of calorie restriction: XI. Evaluation of the main hypotheses underpinning the life extension effects of CR using the hepatic transcriptome
Aging, vol. 9, no. 7, pp. 1770-1824Contributions to Journals: ArticlesThe effects of graded levels of calorie restriction: IX. Global metabolomic screen reveals modulation of carnitines, sphingolipids and bile acids in the liver of C57BL/6 mice
Aging Cell, vol. 16, no. 3, pp. 529-540Contributions to Journals: ArticlesAssessing the consequences of environmental impacts: variation in species responses has unpredictable functional effects
Marine Ecology Progress Series, vol. 583, pp. 35-47Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.3354/meps12358
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/11448/3/Murray_et_al.docx
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/11448/1/Murray_et_al_Appendix_v3.docx
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/11448/2/Murray_Fig1.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/11448/6/Murray_Fig2.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/11448/5/Murray_Fig3.tif
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/11448/4/Murray_Fig4.tif
RADseq-based phylogenomics fully resolves evolutionary relationships in a species complex of sympatric intertidal isopods (Jaera albifrons).
European Society of Evolutionary Biology (ESEB) XVI CongressContributions to Conferences: PostersThe effects of graded levels of calorie restriction: VIII. impact of short term calorie and protein restriction on basal metabolic rate in the C57BL/6 mouse
Oncotarget, vol. 8, no. 11, pp. 17453-17474Contributions to Journals: ArticlesThe genomic landscape of pre-zygotic reproductive isolation in a sympatric species complex of intertidal isopods (Jaera albifrons)
Contributions to Conferences: Oral PresentationsA heavy metal P-type ATPase OsHMA4 prevents copper accumulation in rice grain
Nature Communications, vol. 7, pp. 1-13Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1038/ncomms12138
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/6239/1/ncomms12138.pdf
Gut health and integrity in atlantic salmon fed plant protein diets
Fish & Shellfish Immunology, vol. 53, pp. 69Contributions to Journals: AbstractsThe effects of graded levels of calorie restriction: VII. Topological rearrangement of hypothalamic aging networks
Aging, vol. 8, no. 4, pp. 917-931Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.18632/aging.100944
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/10744/1/aging_08_0917.pdf
- [ONLINE] View publication in Scopus
The effects of graded levels of calorie restriction: VI. Impact of short-term graded calorie restriction on transcriptomic responses of the hypothalamic hunger and circadian signaling pathways
Aging, vol. 8, no. 4, pp. 642-661Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.18632/aging.100895
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/5562/2/aging_08_642.pdf