Senior Lecturer
- About
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- Email Address
- c.s.jones@abdn.ac.uk
- Telephone Number
- +44 (0)1224 272403
- School/Department
- School of Biological Sciences
Latest Publications
Genome analysis reveals three distinct lineages of the cosmopolitan white shark
Current Biology, vol. 34, no. 15, pp. 3582-3590.e4Contributions to Journals: ArticlesEstimating fishing effort and LPUE for the Scottish Brown Crab (Cancer pagurus) trap fishery using VMS and observer data
Fisheries Research, vol. 274, 106974Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.fishres.2024.106974
Mitochondrial haplotypes reveal low diversity and restricted connectivity in the critically endangered batoid population of a Marine Protected Area
Marine Ecology Progress Series, vol. 731, pp. 279-291Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.3354/meps14242
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/20207/1/m14242_advview.pdf
Characteristics of the spiny dogfish (Squalus acanthias) nuclear genome
G3: Genes, Genomes, Genetics Mission, vol. 13, no. 9, jkad146Contributions to Journals: ArticlesFeeding ecology of broadbill swordfish (Xiphias gladius) in the California current
PloS ONE, vol. 18, no. 2, e0258011Contributions to Journals: Articles
- Research
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Research Overview
My research focuses on the application of molecular genetics and genomics to the ecology and conservation of endangered species. As molecular ecologists we use molecular data in elusive marine species to assist conservation management questions, particularly in top predators, the elasmobranchs. Yet the biology of long-lived and enigmatic ‘flagship’ species such as the Great white, basking shark and Flapper skate are surprisingly poorly understood. We seek to comprehend how genetic diversity evolves in these small, highly vagile populations, the role that local adaptation plays and its consequence for conservation biology and management, along with the impacts of renewable energy facilities. We utilize methods such as DNA profiling (genetic tagging) through to next generation sequencing, integrating these data with seascape analyses (GIS) in an effort to provide comprehensive information for biodiversity management and conservation, such as implementation of Marine Protected Areas (MPAs).
Additionally I seek to understand the invasive nature of several Arionid slugs, vectors of many plant diseases, which is of fundamental importance for national and international crop security. Similarly understanding the evolution of host-parasite interactions in several aquatic systems (including the medically important freshwater snail intermediate host of trematodes, Biomphalaria glabrata and the ectoparasitism in commercially important Atlantic salmon by sealice or the monogenean, Gyrodactylus salaris) is of fundamental importance.
Funding and Grants
Recent grants:
2020-2024. Sea Our Seas Foundation (SOSF) Biennial Keystone grant award: ‘Genetic monitoring tool for North-East Atlantic Elasmobranchs to assist conservation and management’. https://saveourseas.com/project/a-genetic-tool-to-help-monitor-sharks-and-skates-in-the-north-east-atlantic/
2018-2023. Nature.Scot ‘Assessing MPA efficacy and adaptive management of the common skate’. (with Peter Wright, Marine Scotland & David Donnan Nature.Scot)
2017-2019. Scottish Universities Life Sciences Alliance (SULSA) EU Partnership Building (PEER) co-PI, ‘International Marine Connectivity Network’, co-PI Oscar Gaggiotti (St. Andrews).
2016-2018. NERC Biomolecular Analysis Facility (NBAF) NBAF965 ‘Genetic structure and connectivity in the endangered yet potentially commercially valuable North Atlantic porbeagle shark: informing conservation and towards sustainable fisheries management.’
2013-2017. Scottish Natural Heritage (SNH). ‘Genetic monitoring of the basking shark, Cetorhinus maximus in Scottish waters to address environmental impacts; effective population size, population connectivity and group kinship’.
2015-2016. NERC Biomolecular Analysis Facility (NBAF) NBAF942 'Genetic monitoring to assess the potential for anthropogenic impacts in the endangered common skate in the north east Atlantic: genetic diversity, connectivity and effective population size'.
2014-2016. NERC Biomolecular Analysis Facility (NBAF) NBAF765 ‘Stock structure, residency and kinship of white shark aggregations along the South African coast.’
2014-2015. NERC Biomolecular Analysis Facility (NBAF) NBAF764 ‘Baseline data for assessing environmental impacts on basking sharks in Scottish waters: effective population size, connectivity and group kinship.'
2013-2015. NERC Biomolecular Analysis Facility (NBAF) NBAF723 'Population structure, kinship and the demographic history of the basking shark, Cetorhinus maximus'.
- Publications
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Page 6 of 9 Results 51 to 60 of 89
Isolation of a novel fish thymidylate kinase gene, upregulated in Atlantic salmon (Salmo salar L.) following infection with the monogenean parasite Gyrodactylus salaris
Fish & Shellfish Immunology, vol. 23, no. 4, pp. 793-807Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.fsi.2007.03.001
The genetical architecture of outbreeding depression in Atlantic salmon
Journal of Fish Biology, vol. 69, pp. 240Contributions to Journals: ArticlesA High incidence of clustered microsatellite mutations revealed by parent-offpring analysis in an African freshwater snail, Bulinus forskalii (Gastropoda, Pulmonata).
Genetica, vol. 124, pp. 77-83Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s10709-005-0204-6
High levels of selfing are revealed by a parent-offspring analysis of the medically-important freshwater snail, Bulinus forskalii (Gastropoda, Pulmonata).
Journal of Molluscan Studies, vol. 71, pp. 175-180Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1093/mollus/eyi020
Breeding system and demography shape population genetic structure across ecological and climatic zones in the African freshwater snail, Bulinus forskalii (Gastropoda, Pulmonata), intermediate host for schistosomes
Molecular Ecology, vol. 13, no. 11, pp. 3561-3573Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/J.1365-294X.2004.02339.X
Polymorphic dinucleotide microsatellite loci in the clonal ascidian Diplosoma listerianum: predominance of compound and highly interrupted imperfect repeats.
Molecular Ecology Notes, vol. 4, no. 2, pp. 283-285Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1471-8286.2004.00643.x
Schistosoma mansoni: Resistant specific infection-induced gene expression in Biomphalaria glabrata identified by fluorescent-based differential display
Experimental Parasitology, vol. 107, no. 1-2, pp. 97-104Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.exppara.2004.04.004
Trematodes and snails: an intimate association
Canadian Journal Of Zoology/Revue Canadien De Zoologie, vol. 82, no. 2, pp. 251-269Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1139/z03-215
Microsatellites in the freshwater snail Bulinus globosus (Gastropoda : Planorbidae) from Zanzibar
Molecular Ecology Notes, vol. 3, no. 1, pp. 108-110Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1046/j.1471-8286.2003.00368.x
Molluscs, molecules and man: Towards new perspectives in Host-parasite interactions and future control strategies
Other Contributions: Other Contributions