Publications | The School of Biological Sciences

Saprolegnia parasitica

2024

Apostolakis, K., Secombes, C. J., van West, P.

Fish Parasites: A Handbook of Protocols for their Isolation, Culture and Transmission. CABI International, pp. 390-401, 12 pages

Chapters in Books, Reports and Conference Proceedings: Chapters

Additional Links: View publication in Scopus

Diseases of marine fish and shellfish in an age of rapid climate change

2024

Rowley, A. f., Baker-Austin, C., Boerlage, A. s., Caillon, C., Davies, C. e., Duperret, L., Martin, S. a., Mitta, G., Pernet, F., Pratoomyot, J., Shields, J. d., Shinn, A. p., Songsungthong, W., Srijuntongsiri, G., Sritunyalucksana, K., Vidal-Dupiol, J., Uren webster, T. m., Taengchaiyaphum, S., Wongwaradechkul, R., Coates, C. j.

iScience, vol. 27, no. 9, 110838

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.isci.2024.110838
Open Access: http://aura.abdn.ac.uk/bitstream/2164/24364/1/Rowley_etal_CP_Diseases_Of_Marine_VoR.pdf

Rediscovery of the rare Cladochroa chnoosporiformis Skottsberg from the Falkland Islands and its merger with Utriculidium durvillei Skottsberg

2024 - E-pub ahead of print

Mystikou, A., Asensi, A. O., Peters, A. F., Kytinou, E., Amin, S., Brickle, P., van West, P., Kuepper, F.

Botanica Marina

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1515/bot-2023-0044
Open Access: http://aura.abdn.ac.uk/bitstream/2164/24617/1/Mystikou_etal_BM_Rediscovery_Of_The_AAM.pdf

Dynamics of Gill Responses to a Natural Infection with Neoparamoeba perurans in Farmed Tasmanian Atlantic Salmon

2024

Vallarino, M. C., Dagen, S. L., Costelloe, E., Oyenekan, S. I., Tinsley, J., Valdenegro, V., Król, E., Noguera, P., Martin, S. A. M.

Animals, vol. 14, no. 16, 2356

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/ani14162356
Open Access: http://aura.abdn.ac.uk/bitstream/2164/24165/1/Vallarino_etal_A_Dynamics_Of_Gill_VoR.pdf

Association of microbial community structure with gill disease in marine-stage farmed Atlantic salmon (Salmo salar);: a yearlong study

2024

Clinton, M., Wyness, A. J., Martin, S. A., Brierley, A. S., Ferrier, D. E.

BMC Veterinary Research, vol. 20, 340

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1186/s12917-024-04125-5
Open Access: http://aura.abdn.ac.uk/bitstream/2164/24187/1/Clinton_etal_BMCVR_Association_of_Microbial_Community_VOR.pdf
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Modulation of metabolic and immunoregulatory pathways in the gut transcriptome of Atlantic Salmon (Salmo salar L.) after early nutritional programming during first feeding with plant-based diet

2024

Tawfik, M. M., Betancor, M. B., McMillan, S., Norambuena, F., Tocher, D. R., Douglas, A., Martin, S.

Frontiers in Immunology, vol. 15, 1412821

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2024.1412821
Open Access: http://aura.abdn.ac.uk/bitstream/2164/23744/1/Tawfik_etal_FiI_Modulation_of_Metabolic_VOR.pdf

Impact of freshwater rearing history on Atlantic salmon gill response to viral stimulation post seawater transfer

2024

Lorgen-Ritchie, M., Chalmers, L., Clarkson, M., Taylor, J. F., MacKenzie, S., Migaud, H., Martin, S.

Fish and Shellfish Immunology, vol. 150, 109653

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2024.109653
Open Access: http://aura.abdn.ac.uk/bitstream/2164/23801/1/Lorgen-Ritchie_etal_FSI_Impact_of_freshwater_VOR.pdf

Modulation of gut microbiota composition and predicted metabolic capacity after nutritional programming with a plant-rich diet in Atlantic salmon (Salmo salar): insights across developmental stages

2024

Tawfik, M. M., Lorgen-Ritchie, M., Krol, E., McMillan, S., Norambuena, F., Bolnick, D. I., Douglas, A., Tocher, D. R., Betancor, M. B., Martin, S.

Animal Microbiome, vol. 6, 38

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1186/s42523-024-00321-8
Open Access: http://aura.abdn.ac.uk/bitstream/2164/23923/1/Tawfik_etal_AM_Modulation_of_gut_VOR.pdf

Evaluation of the efficacy of MONTANIDE™ GR01, a new adjuvant for feed-based vaccines, on the immune response and protection against Streptococcus agalactiae in oral vaccinated Nile tilapia (Oreochromis niloticus) under laboratory and on-farm conditions

2024

Pholchamat, S., Vialle, R., Luang-In, V., Phadee, P., Wang, B., Wang, T., Secombes, C. J., Wangkahart, E.

Fish & Shellfish Immunology, vol. 149, 109567

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2024.109567

Macroalgal eukaryotic microbiome composition indicates novel phylogenetic diversity and broad host spectrum of oomycete pathogens

2024

Timanikova, N., Fletcher, K., Han, J., van West, P., Woodward, S., Kim, G., Kuepper, F., Wenzel, M.

Environmental Microbiology, vol. 26, no. 6, e16656

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1111/1462-2920.16656
Open Access: http://aura.abdn.ac.uk/bitstream/2164/23963/1/Timanikova_etal_EM_Macroalgala_Eukaryotic_Microbiome_VoR.pdf
Additional Links: View publication in Scopus

Can nutritional programming in Atlantic salmon (Salmo salar) be optimised with a reduced stimulus period?

2024

McMillan, S., Martin, S. A., Król, E., Norambuena, F., Baumgärtner, S., Gong, X., Tawfik, M. M., Glencross, B., Taylor, J. F., Tocher, D. R., Betancor, M. B.

Aquaculture, vol. 585, 740686

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.aquaculture.2024.740686
Open Access: http://aura.abdn.ac.uk/bitstream/2164/23359/1/McMillan_etal_AC_Can_Nutritional_Programming_VOR.pdf
Additional Links: View publication in Scopus

Mapping the cellular landscape of Atlantic salmon head kidney by single cell and single nucleus transcriptomics

2024

Andresen, A. M. S., Taylor, R. S., Grimholt, U., Daniels, R. R., Sun, J., Dobie, R., Henderson, N. C., Martin, S. A. M., Macqueen, D. J., Fosse, J. H.

Fish & Shellfish Immunology, vol. 146, 109357

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2024.109357
Open Access: http://aura.abdn.ac.uk/bitstream/2164/22763/1/Andersen_etal_FSI_Mapping_the_Cellular.pdf

Cell atlas of the Atlantic salmon spleen reveals immune cell heterogeneity and cell-specific responses to bacterial infection

2024

Sun, J., Ruiz Daniels, R., Balic, A., Andresen, A. M. S., Bjørgen, H., Dobie, R., Henderson, N. C., Koppang, E. O., Martin, S. A. M., Fosse, J. H., Taylor, R. S., Macqueen, D. J.

Fish & Shellfish Immunology, vol. 145, pp. 109358

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2024.109358
Open Access: http://aura.abdn.ac.uk/bitstream/2164/22744/1/Sun_etal_FSI_Cell_Atlas_of_VOR.pdf

Specific Phylotypes of Saprolegnia parasitica Associated with Atlantic Salmon Freshwater Aquaculture

2024

Shreves, K., Saraiva, M., Ruba, T., Miller, C., Scott, M., McLaggan, D., van West, P.

Journal of Fungi, vol. 10, no. 1, 57

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/jof10010057
Open Access: http://aura.abdn.ac.uk/bitstream/2164/22517/1/Shreves_etal_JoF_Specific_Phylotypes_of_VOR.pdf

Advancements, deficiencies, and future necessities of studying Saprolegniales: A semi-quantitative review of 1073 published papers

2023

Masigol, H., van West, P., Taheri, S. R., Fregeneda-Grandes, J. M., Pârvulescu, L., McLaggan, D., Bliss, T. T., Mostowfizadeh-Ghalamfarsa, R., Pourmoghaddam, M. J., Grossart, H. P.

Fungal Biology Reviews, vol. 46, 100319

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2023.100319
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20918/1/Masigol_BMS_Advancememts_Deficiencies_and_VOR.pdf
Additional Links: View publication in Scopus

Time is a stronger predictor of microbiome community composition than tissue in external mucosal surfaces of Atlantic salmon (Salmo salar) reared in a semi-natural freshwater environment

2023

Lorgen-Ritchie, M., Chalmers, L., Clarkson, M., Taylor, J. F., Migaud, H., Martin, S. A.

Aquaculture, vol. 566, 739211

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.aquaculture.2022.739211
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19789/1/LorgenRitchie_etal_AC_Time_Stronger_Prediction_VOR.pdf

Phylogeny and expression of tetraspanin CD9 paralogues in rainbow trout (Oncorhynchus mykiss)

2023

Dehler, C. E., Boudinot, P., Collet, B., Martin, S. A.

Developmental and Comparative Immunology, vol. 146, 104735

Contributions to Journals: Articles

Online: https://www.sciencedirect.com/science/article/pii/S0145305X23001052
Digital Object Identifier: https://doi.org/10.1016/j.dci.2023.104735
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20804/1/Dehler_etal_DCI_Phylogeny_and_Expression_VOR.pdf

Catch of the Day: New Serum Amyloid A (SAA) Antibody Is a Valuable Tool to Study Fish Health in Salmonids

2023

Buks, R., Alnabulsi, A., Zindrili, R., Alnabulsi, A., Wang, A., Wang, T., Martin, S. A.

Cells, vol. 12, no. 16, 2097

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/cells12162097
Open Access: http://aura.abdn.ac.uk/bitstream/2164/21505/1/Buks_etal_C_Catch_OF_The_VoR.pdf
Additional Links: View publication in Scopus

Conserved and divergent arms of the antiviral response in the duplicated genomes of salmonid fishes

2023

Clark, T., Naseer, S., Gundappa, M. K., Laurent, A., Perquis, A., Collet, B., Macqueen, D. J., Martin, S. A., Boudinot, P.

Genomics, vol. 115, no. 4, 110663

Contributions to Journals: Articles

Online: https://www.sciencedirect.com/science/article/pii/S0888754323001076
Digital Object Identifier: https://doi.org/10.1016/j.ygeno.2023.110663
Open Access: http://aura.abdn.ac.uk/bitstream/2164/21171/1/Clark_etal_G_Conserved_and_divergent_VOR.pdf
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A Summer Heat Wave Reduced Activity, Heart Rate, and Autumn Body Mass in a Cold-Adapted Ungulate

2023

Trondrud, L. M., Pigeon, G., Król, E., Albon, S., Ropstad, E., Kumpula, J., Evans, A. L., Speakman, J. R., Loe, L. E.

Physiological and Biochemical Zoology, vol. 96, no. 4, pp. 247-320

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1086/725363
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20475/2/Trondrud_etal_PBZ_Summer_Heat_Wave_VOR.pdf

Microbiomes in the context of developing sustainable intensified aquaculture

2023

Lorgen-Ritchie, M., Uren Webster, T., McMurtrie, J., Bass, D., Tyler, C. R., Rowley, A., Martin, S. A. M.

Frontiers in Microbiology, vol. 14, 1200997

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.3389/fmicb.2023.1200997
Open Access: http://aura.abdn.ac.uk/bitstream/2164/21144/1/LorgenRitchie_etal_fmicb_Microbiomes_context_developing_VOR.pdf
Additional Links: View publication in Scopus

Deciphering the Immunostimulatory Effects of β-Glucan on a Rainbow Trout (Oncorhynchus mykiss) Macrophage-like Cell Line (RTS11) by Whole Transcriptome Analysis: Genes

2023

Porter, D., Naseer, S., Peggs, D., McGurk, C., Martin, S. A.

Genes, vol. 14, no. 6, 1261

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/genes14061261
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20886/1/Porter_Etal_G_Deciphering_The_Immunostimulatory_VOR.pdf

Novel insights into the cytokine network of rainbow trout Oncorhynchus mykiss using cell lines and primary leukocyte populations

2023

Liu, F., Dixon, B., Del Mar Ortega-Villaizan, M., Tafalla, C., Xu, H., Secombes, C. J., Wang, T.

Fish & Shellfish Immunology, vol. 137, 108755

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2023.108755

Diseases and disorders in fish due to harmful algal blooms

2023

Shahmohamadloo, R. S., Frenken, T., Rudman, S. M., van West, P., Ibelings, B. W., Trainer, V. L.

Climate Change on Diseases and Disorders of Finfish in Cage Culture. Woo, P. T. K., Subasinghe, R. P. (eds.). 3 edition. CABI International, pp. 387-429, 43 pages

Chapters in Books, Reports and Conference Proceedings: Chapters

Digital Object Identifier: https://doi.org/10.1079/9781800621640.0010
Additional Links: View publication in Scopus

Fur removal promotes an earlier expression of involution-related genes in mammary gland of lactating mice

2023

Krol, E., Turner, F., Derous, D., Mitchell, S. E., Martin, S., Douglas, A., Speakman, J.

Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology, pp. 171-192

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1007/s00360-023-01474-9
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19855/1/Krol_etal_JCPB_Fur_Removal_Promotes_VoR.pdf

The molecular dialog between oomycete effectors and their plant and animal hosts

2023

Saraiva, M., Ściślak, M. E., Ascurra, Y. T., Ferrando, T. M., Zic, N., Henard, C., van West, P., Trusch, F., Vleeshouwers, V. G.

Fungal Biology Reviews, vol. 43, 100289

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2022.10.002
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20084/1/Saraiva_etal_BMS_The_Molecular_Dialog_VoR.pdf
Additional Links: View publication in Scopus

Comparative study of the effects of Montanide™ ISA 763A VG and ISA 763B VG adjuvants on the immune response against Streptococcus agalactiae in Nile tilapia (Oreochromis niloticus)

2023

Wangkahart, E., Thongsrisuk, A., Vialle, R., Pholchamat, S., Sunthamala, P., Phudkliang, J., Srisapoome, P., Wang, T., Secombes, C. J.

Fish & Shellfish Immunology, vol. 134, 108563

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2023.108563
Open Access: http://aura.abdn.ac.uk/bitstream/2164/22649/1/Wangkahart_etal_FSI_Comparative_Study_Of_AAM.pdf

In-vivo analysis of Protec™ and β-glucan supplementation on innate immune performance and intestinal health of rainbow trout

2023

Porter, D., Peggs, D., McGurk, C., Martin, S.

Fish & Shellfish Immunology, vol. 134, 108573

Contributions to Journals: Articles

Online: https://www.sciencedirect.com/science/article/pii/S1050464823000591
Digital Object Identifier: https://doi.org/10.1016/j.fsi.2023.108573
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20101/1/Porter_etal_FSI_Invivo_Analysis_Protec_VOR.pdf

Survival of Phytophthora cryptogea and Phytophthora cactorum in Commercial Potting Substrates for Eucalyptus globulus Plants

2023

Benavent-Celma, C., McLaggan, D., van West, P., Woodward, S.

Agriculture (Switzerland), vol. 13, no. 3, 581

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/agriculture13030581
Open Access: http://aura.abdn.ac.uk/bitstream/2164/21012/1/Benavent_Celma_A_Survival_of_Phytophthora_VOR.pdf
Additional Links: View publication in Scopus

Impact of abiotic factors and husbandry on saprolegniosis in salmonid farms

2022

Tedesco, P., Saraiva, M., Sandoval-Sierra, J. V., Alves, M. T., Galuppi, R., Dieguez-Uribeondo, J., van West, P., Cook, A., Posen, P., Oidtmann, B., Fioravanti, M.

Aquaculture, vol. 561, 738679

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.aquaculture.2022.738679
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19286/1/Tedesco_et_al_Impact_abiotic_Aquaculture_vor.pdf
Additional Links: View publication in Scopus

Infectious pancreatic necrosis virus (IPNV) recombinant viral protein 1 (VP1) and VP2-Flagellin fusion protein elicit distinct expression profiles of cytokines involved in type 1, type 2, and regulatory T cell response in rainbow trout (Oncorhynchus mykiss)

2022

Wong-Benito, V., Barraza, F., Trujillo-Imarai, A., Ruiz-Higgs, D., Montero, R., Sandino, A. M., Wang, T., Maisey, K., Secombes, C. J., Imarai, M.

Fish & Shellfish Immunology, vol. 131, pp. 785-795

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2022.10.060
Open Access: http://aura.abdn.ac.uk/bitstream/2164/22101/1/Wong_etal_FSI_Infectious_Pancreatic_Necrosis_AAM.pdf

RTG-TOF, a rainbow trout (Oncorhynchus mykiss) cell line with an inducible gene expression system

2022

Holland, J. W., Secombes, C. J., Collet, B.

In vitro cellular & developmental biology. Animal, vol. 58, pp. 851-854

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1007/s11626-022-00735-1

Gut Associated Lymphoid Tissue (GALT) primary cells and stable cell lines as predictive models for intestinal health in rainbow trout (Oncorhynchus mykiss)

2022

Porter, D., Peggs, D., McGurk, C., Martin, S. A. M.

Frontiers in Immunology, vol. 13, 1023235

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2022.1023235
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19461/1/Porter_etal_FI_Gut_Associated_Lymphoid_VoR.pdf

Temporal changes in skin and gill microbiomes of Atlantic salmon in a recirculating aquaculture system – Why do they matter?

2022

Lorgen-Ritchie, M., Clarkson, M., Chalmers, L., Taylor, J. F., Migaud, H., Martin, S. A.

Aquaculture, vol. 558, 738352

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.aquaculture.2022.738352
Open Access: http://aura.abdn.ac.uk/bitstream/2164/18851/1/Lorgen_Ritchie_etal_A_Temporal_Changes_In_VoR.pdf
Additional Links: View publication in Scopus

Search for effective oral adjuvants for rainbow trout (Oncorhynchus mykiss)

2022

Docando, F., Arense, P., Martín-Martín, A., Wang, T., Tafalla, C., Díaz-Rosales, P.

Fish and Shellfish Immunology, vol. 128, pp. 419-424

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2022.07.039
Additional Links: View publication in Scopus

Single cell transcriptomics of Atlantic salmon (Salmo salar L.) liver reveals cellular heterogeneity and immunological responses to challenge by Aeromonas salmonicida.

2022

Taylor, R. S., Ruiz Daniels, R., Dobie, R., Naseer, S., Clark, T. C., Henderson, N. C., Boudinot, P., Martin, S. A. M., Macqueen, D. J.

Frontiers in Immunology, vol. 13, 984799

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2022.984799
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19577/1/Taylor_et_al_Single_cell_Frontiers_in_Immunology_vor.pdf

Immune responses to prebiotics in farmed salmonid fish: How transcriptomic approaches help interpret responses

2022

Porter, D., Peggs, D., McGurk, C., Martin, S.

Fish & Shellfish Immunology, vol. 127, pp. 35-47

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2022.05.055
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20769/1/Porter_etal_FSI_Immune_Responses_To_VoR.pdf

Current practices and emerging possibilities for reducing the spread of oomycete pathogens in terrestrial and aquatic production systems in the European Union

2022

Benavent-Celma, C., López-García, N., Ruba, T., Ściślak, M. E., Street-Jones, D., van West, P., Woodward, S., Witzell, J.

Fungal Biology Reviews, vol. 40, pp. 19-36

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2021.10.001

Can Ulcerative Dermal Necrosis (UDN) in Atlantic salmon be attributed to ultraviolet radiation and secondary Saprolegnia parasitica infections?

2022

Henard, C., Saraiva, M. R., Ściślak, M. E., Ruba, T., McLaggan, D., Noguera, P., van West, P.

Fungal Biology Reviews, vol. 40, pp. 70-75

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2022.02.002
Open Access: http://aura.abdn.ac.uk/bitstream/2164/18504/1/Henard_et_al_Can_Ulcerative_Fungal_Biology_Reviews_vor.pdf
Additional Links: View publication in Scopus

Genome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolution

2022

Gundappa, M. K., To, T., Grønvold, L., Martin, S. A. M., Lien, S., Geist, J., Hazlerigg, D., Sandve, S. R., Macqueen, D. J.

Molecular Biology and Evolution, vol. 39, no. 1, msab310

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1093/molbev/msab310
Open Access: http://aura.abdn.ac.uk/bitstream/2164/18010/1/Gundappa_etal_Genome_wide_reconstruction_of_VOR.pdf

Transformation systems, gene silencing and gene editing technologies in oomycetes

2021 - E-pub ahead of print

Ghimire, B., Saraiva, M., Andersen, C. B., Gogoi, A., Saleh, M., Zic, N., van West, P., Brurberg, M. B.

Fungal Biology Reviews

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2021.11.001
Additional Links: View publication in Scopus

CD38 Defines a Subset of B Cells in Rainbow Trout Kidney With High IgM Secreting Capacities

2021

Martín, D., Perdiguero, P., Morel, E., Soleto, I., Herranz-Jusdado, J. G., Ramón, L. A., Abós, B., Wang, T., Díaz-Rosales, P., Tafalla, C.

Frontiers in Immunology, vol. 12, 773888

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2021.773888
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17878/1/Martin_et_al_Defines_Subset_Frontiers_in_Immunology_vor.pdf
Additional Links: View publication in Scopus

Phylogenetic and Functional Diversity of Saprolegniales and Fungi Isolated from Temperate Lakes in Northeast Germany

2021

Masigol, H., Woodhouse, J. N., van West, P., Mostowfizadeh-Ghalamfarsa, R., Rojas-Jimenez, K., Goldhammer, T., Khodaparast, S. A., Grossart, H.

Journal of Fungi, vol. 7, no. 11, 968

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/jof7110968
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17509/1/Masigol_etal_JF_Phylogenetic_And_Functional_VoR.pdf

Sampling the fish gill microbiome: a comparison of tissue biopsies and swabs

2021

Clinton, M., Wyness, A. J., Martin, S. A., Brierley, A. S., Ferrier, D. E.

BMC Microbiology, vol. 21, 313

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1186/s12866-021-02374-0
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17638/1/Clinton_etal_BMC_sampling_the_fish_VOR.pdf
Additional Links: View publication in Scopus

Characterisation and analysis of IFN-gamma producing cells in rainbow trout Oncorhynchus mykiss

2021

Hu, Y., Alnabulsi, A., Alnabulsi, A., Scott, C., Tafalla, C., Secombes, C. J., Wang, T.

Fish & Shellfish Immunology, vol. 117, pp. 328-338

Contributions to Journals: Articles

Online: https://www.sciencedirect.com/science/article/pii/S1050464821002199
Digital Object Identifier: https://doi.org/10.1016/j.fsi.2021.07.022

Artificial Intelligence Driven Platforms to Develop Novel Assays to Monitor Fish Health

2021

Buks, R., Hu, Y., Alnabulsi, A., Alnabulsi, A., Secombes, C., Wang, T., Martin, S.

Aquaculture Europe 2021

Contributions to Conferences: Posters

Immune response and protective efficacy of two new adjuvants, Montanide™ ISA 763B VG and Montanide™ GEL02, administered with a Streptococcus agalactiae ghost vaccine in Nile tilapia (Oreochromis niloticus)

2021

Wangkaghart, E., Deville, S., Wang, B., Srisapoome, P., Wang, T., Secombes, C. J.

Fish & Shellfish Immunology, vol. 116, pp. 19-29

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2021.06.014

Determinants of heart rate in Svalbard reindeer reveal mechanisms of seasonal energy management

2021

Trondrud, L. M., Pigeon, G., Albon, S., Arnold, W., Evans, A. L., Irvine, R. J., Król, E., Ropstad, E., Stien, A., Veiberg, V., Speakman, J. R., Loe, L. E.

Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 376, no. 1831, 20200215

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1098/rstb.2020.0215
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16961/1/Trondrud_etal_rstb_Determinants_of_heart_VOR.pdf
Additional Links: View publication in Scopus

Impacts of jellyfish on marine cage aquaculture: An overview of existing knowledge and the challenges to finfish health

2021

Clinton, M., Ferrier, D. E., Martin, S. A., Brierley, A. S.

ICES Journal of Marine Science, vol. 78, no. 5, pp. 1557-1573

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1093/icesjms/fsaa254
Additional Links: View publication in Scopus

Evaluation of potential transfer of the pathogen Saprolegnia parasitica between farmed salmonids and wild fish

2021

Tedesco, P., Saraiva, M., Sandoval-Sierra, J. V., Fioravanti, M. L., Morandi, B., Dieguez-Uribeondo, J., Van West, P., Galuppi, R.

Pathogens, vol. 10, no. 8, 926

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/pathogens10080926
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17042/1/Tedesco_etal_pathogens_Evaluation_of_potential_VOR.pdf
Additional Links: View publication in Scopus

A Temporally Dynamic Gut Microbiome in Atlantic Salmon During Freshwater Recirculating Aquaculture System (RAS) Production and Post-seawater Transfer

2021

Lorgen-Ritchie, M., Clarkson, M., Chalmers, L., Taylor, J. F., Migaud, H., Martin, S. A. M.

Frontiers in Marine Science, vol. 8, 869

Contributions to Journals: Articles

Online: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA729215
Digital Object Identifier: https://doi.org/10.3389/fmars.2021.711797
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16783/1/Lorgen_etal_fmars_temporally_dynamic_gut_VOR.pdf

Fat storage influences fasting endurance more than body size in an ungulate

2021

Trondrud, L. M., Pigeon, G., Król, E., Albon, S., Evans, A. L., Arnold, W., Hambly, C., Irvine, R. J., Ropstad, E., Stien, A., Veiberg, V., Speakman, J. R., Loe, L. E.

Functional Ecology, vol. 35, no. 7, pp. 1470-1480

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1111/1365-2435.13816
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17163/1/Trondrud_etal_FE_Fat_storage_influences_VOR.pdf

Montanide™ ISA 763A VG and ISA 761 VG induce different immune pathway responses in rainbow trout (Oncorhynchus mykiss) when used as adjuvant for an Aeromonas salmonicida bacterin

2021

Veenstra, K. A., Wang, T., Russell, K. S., Tubbs, L., Ben Arous, J., Secombes, C. J.

Fish & Shellfish Immunology, vol. 114, pp. 171-183

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2021.04.024

Pathogenicity and Host Range of Pythium kashmirense: a soil-borne oomycete recently discovered in the UK

2021

Benavent Celma, C., Puertolas, A., McLaggan, D., van West, P., Woodward, S.

Journal of Fungi, vol. 7, no. 6, 479

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/jof7060479
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16669/1/Benavent_etal_JoF_Pathogenicity_And_Host_VoR.pdf

Development of a 3D spheroid cell culture system from fish cell lines for in vitro infection studies: Evaluation with Saprolegnia parasitica

2021

Faber, M. N., Sojan, J. M., Saraiva, M., van West, P., Secombes, C. J.

Journal of Fish Diseases, vol. 44, no. 6, pp. 701-710

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1111/jfd.13331
Additional Links: View publication in Scopus

Immunologic Profiling of the Atlantic Salmon Gill by Single Nuclei Transcriptomics

2021

West, A. C., Mizoro, Y., Wood, S. H., Ince, L. M., Iversen, M., Jørgensen, E. H., Nome, T., Sandve, S. R., Martin, S. A. M., Loudon, A. S. I., Hazlerigg, D. G.

Frontiers in Immunology, vol. 12, 669889

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2021.669889
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16374/1/West_etal_FiI_Immunologic_Profiling_Of_VoR.pdf

Photoperiod-dependent developmental reprogramming of the transcriptional response to seawater entry in Atlantic salmon (Salmo salar)

2021

Iversen, M., Mulugeta, T., West, A., Jørgensen, E. H., Martin, S. A. M., Sandve, S. R., Hazlerigg, D.

G3: Genes, Genomes, Genetics Mission, vol. 11, no. 4, jkab072

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1093/g3journal/jkab072
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16304/1/Iversen_etal_Photoperiod_dependent_developmental_reprogramming_VOR.pdf

Evolutionary Analysis of Cystatins of Early-Emerging Metazoans Reveals a Novel Subtype in Parasitic Cnidarians

2021

Bartošová-Sojková, P., Kyslík, J., Alama-Bermejo, G., Hartigan, A., Atkinson, S. D., Bartholomew, J. L., Picard-Sánchez, A., Palenzuela, O., Faber, M. N., Holland, J. W., Holzer, A. S.

Biology, vol. 10, no. 2, 110

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/biology10020110
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16219/1/bartosova_etal_evolutionary_analysis_of_VOR.pdf

Comparative transcriptomics and host-specific parasite gene expression profiles inform on drivers of proliferative kidney disease

2021

Faber, M., Shaw, S., Yoon, S., De Paiva Alves, E., Wang, B., Qi, Z., Okamura, B., Hartikainen, H., Secombes, C., Holland, J.

Scientific Reports, vol. 11, 2149

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1038/s41598-020-77881-7
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15869/1/Faber_etal_SR_Comparative_Transcriptomics_Host_VOR.pdf

Revisiting the teleost thymus: Current knowledge and future perspectives

2021

Barraza, F., Montero, R., Wong-Benito, V., Valenzuela, H., Godoy-Guzmán, C., Guzmán, F., Köllner, B., Wang, T., Secombes, C. J., Maisey, K., Imarai, M.

Biology, vol. 10, no. 1, 8

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/biology10010008
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16235/1/Bazarra_etal_revisiting_the_teleost_VOR.pdf
Additional Links: View publication in Scopus

Transcriptome analysis reveals immune pathways underlying resistance in the common carp Cyprinus carpio against the oomycete Aphanomyces invadans

2021

Verma, D. K., Peruzza, L., Trusch, F., Yadav, M. K., Ravindra, , Shubin, S. V., Morgan, K. L., Mohindra, V., Hauton, C., van West, P., Pradhan, P. K., Sood, N.

Genomics, vol. 113, no. 1P2, pp. 944-956

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.ygeno.2020.10.028
Additional Links: View publication in Scopus

Exploring genetic resistance to infectious salmon anaemia virus in Atlantic salmon by genome-wide association and RNA sequencing

2021

Gervais, O., Barria, A., Papadopoulou, A., Gratacap, R. L., Hillestad, B., Tinch, A. E., Martin, S. A. M., Robledo, D., Houston, R. D.

BMC Genomics, vol. 22, no. 1, 345

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1186/s12864-021-07671-6
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16456/1/Gervais_etal_BMCG_Exploring_Genetic_Resistance_VoR.pdf

Molecular insights into the mechanisms of susceptibility of Labeo rohita against oomycete Aphanomyces invadans

2020

Pradhan, P. K., Verma, D. K., Peruzza, L., Gupta, S., Haq, S. A., Shubin, S. V., Morgan, K. L., Trusch, F., Mohindra, V., Hauton, C., van West, P., Sood, N.

Scientific Reports, vol. 10, 19531

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1038/s41598-020-76278-w
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15653/1/Pradhan_MolecularInsightsLabeoRohita_VOR.pdf
Additional Links: View publication in Scopus

Saprolegnia infection after vaccination in Atlantic salmon is associated with differential expression of stress and immune genes in the host

2020

Beckmann, M. J., Saraiva, M., McLaggan, D., Pottinger, T. G., van West, P.

Fish & Shellfish Immunology, vol. 106, pp. 1095-1105

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2020.08.051
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17025/1/Beckmann_et_al_FSI_SaprolegniaInfectionAfterVaccination_AAM.pdf
Additional Links: View publication in Scopus

Ancient Cytokine Interleukin 15-Like (IL-15L) Induces a Type 2 Immune Response

2020

Yamaguchi, T., Chang, C. J., Karger, A., Keller, M., Pfaff, F., Wangkahart, E., Wang, T., Secombes, C. J., Kimoto, A., Furihata, M., Hashimoto, K., Fischer, U., Dijkstra, J. M.

Frontiers in Immunology, vol. 11, 549319

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2020.549319
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16387/1/Yamaguchi_at_al_FrontInImmuno_AncientCytokine_VOR.pdf
Additional Links: View publication in Scopus; Supplementary Material

The structural variation landscape in 492 Atlantic salmon genomes

2020

Bertolotti, A. C., Layer, R. M., Gundappa, M. K., Gallagher, M. D., Pehlivanoglu, E., Nome, T., Robledo, D., Kent, M. P., Røsæg, L. L., Holen, M. M., Mulugeta, T. D., Ashton, T. J., Hindar, K., Sægrov, H., Florø-Larsen, B., Erkinaro, J., Primmer, C. R., Bernatchez, L., Martin, S. A. M., Johnston, I. A., Sandve, S. R., Lien, S., MacQueen, D. J.

Nature Communications, vol. 11, 5176

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1038/s41467-020-18972-x
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15273/1/Bertolotti_et_al_NC_TheStructuralVariationLandscape_VoR.pdf
Additional Links: View publication in Scopus

Distinct modes of action of CD40L and adaptive cytokines IL-2, IL-4/13, IL-10 and IL-21 on rainbow trout IgM+ B cells

2020

Abos, B., Wang, T., Secombes, C. J., Tafalla, C.

Developmental and Comparative Immunology, vol. 111, 103752

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.dci.2020.103752
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14475/1/Abos_et_al_DCI_DictinctModesOfAction_VoR.pdf
Additional Links: View publication in Scopus

Effective isolation of GALT cells: Insights into the intestine immune response of rainbow trout (Oncorhynchus mykiss) to different bacterin vaccine preparations

2020

Attaya, A., Secombes, C. J., Wang, T.

Fish & Shellfish Immunology, vol. 105, pp. 378-392

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2020.06.051
Open Access: http://aura.abdn.ac.uk/bitstream/2164/16746/1/Attaya_et_al_FSI_EffectiveIsolationOf_AAM.pdf
Additional Links: View publication in Scopus

A portrait of the immune response to proliferative kidney disease (PKD) in rainbow trout

2020

Bailey, C., Holland, J. W., Secombes, C. J., Tafalla, C.

Parasite Immunology, vol. 42, no. 8, e12730

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1111/pim.12730
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14755/1/pim.12730_1_.pdf
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Type I interferon regulates the survival and functionality of B cells in rainbow trout: Type I Interferon Regulates the Survival and Functionality of B Cells in Rainbow Trout (Front. Immunol., (2020), 11, (1494), 10.3389/fimmu.2020.01494)

2020

Benedicenti, O., Wang, T., Morel, E., Secombes, C. J., Soleto, I., Díaz-Rosales, P., Tafalla, C.

Frontiers in Immunology, vol. 11, 1494

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2021.778085
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14849/1/Benedicenti_etal_fimmu_Type_I_VOR.pdf; http://aura.abdn.ac.uk/bitstream/2164/14849/2/Benedicenti_et_al_Corrigendum_Type_Frontiers_inImmunology_vor.pdf
Additional Links: View publication in Scopus

Harnessing genomics to fast-track genetic improvement in aquaculture

2020

Houston, R. D., Bean, T. P., MacQueen, D. J., Gundappa, M. K., Jin, Y. H., Jenkins, T. L., Selly, S. L. C., Martin, S. A. M., Stevens, J. R., Santos, E. M., Davie, A., Robledo, D.

Nature Reviews Genetics, vol. 21, no. 7, pp. 389-409

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1038/s41576-020-0227-y
Additional Links: View publication in Scopus; Springer Sharedit link

Efficient CRISPR/Cas9 genome editing in a salmonid fish cell line using a lentivirus delivery system

2020

Gratacap, R. L., Regan, T., Dehler, C. E., Martin, S. A. M., Boudinot, P., Collet, B., Houston, R. D.

BMC Biotechnology, vol. 20, 35

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1186/s12896-020-00626-x
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14685/1/Gratacap_etal_BMC_Biotech_Efficient_CRISPR_VOR.pdf
Additional Links: View publication in Scopus

Integration of Transcriptome, Gross Morphology and Histopathology in the Gill of Sea Farmed Atlantic Salmon (Salmo salar): Lessons from Multi-site Sampling

2020

Krol, E., Noguera, P., Shaw, S., Costelloe, E., Gajardo, K., Valdenegro, V., Bickerdike, R., Douglas, A., Martin, S. A. M.

Frontiers in Genetics, vol. 11, 610

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fgene.2020.00610
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14543/1/Krol_et_al_FIG_IntegrationOfTranscriptome_VoR.pdf
Additional Links: View publication in Scopus

Host and pathogen autophagy are central to the inducible local defences and systemic response of the giant kelp Macrocystis pyrifera against the oomycete pathogen Anisolpidium ectocarpii

2020

Murua, P., Müller, D. G., Etemadi, M., van West, P., Gachon, C. M. M.

New Phytologist, vol. 226, no. 5, pp. 1445-1460

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1111/nph.16438
Open Access: http://aura.abdn.ac.uk/bitstream/2164/13982/1/Murua_HostAndPathogenAuophagy_VOR.pdf
Additional Links: View publication in Scopus

Morphological, genotypic and metabolomic signatures confirm interfamilial hybridization between the ubiquitous kelps Macrocystis (Arthrothamnaceae) and Lessonia (Lessoniaceae)

2020

Murúa, P., Edrada-Ebel, R., Munoz, L., Soldatou, S., Legrave, N., Müller, D. G., Patino, D., van West, P., Kuepper, F., Westermeier, R., Ebel, R., Peters, A. F.

Scientific Reports, vol. 10, 8279

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1038/s41598-020-68820-7
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14366/1/Mur_a_etal_SR_Morphological_VOR.pdf
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The influence of depth and season on the benthic communities of a Macrocystis pyrifera forest in the Falkland Islands

2020

Beaton, E. C., Küpper, F. C., van West, P., Brewin, P. E., Brickle, P.

Polar Biology, vol. 43, pp. 573-586

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1007/s00300-020-02662-x
Additional Links: View publication in Scopus

Arginine, ornithine and citrulline supplementation in rainbow trout: Free amino acid dynamics and gene expression responses to bacterial infection

2020

Clark, T., Tinsley, J., Sigholt, T., MacQueen, D., Martin, S.

Fish & Shellfish Immunology, vol. 98, pp. 374-390

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2020.01.026
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15695/1/Clark_et_al_FSI_ArginineOrithineCitrulline_AAM.pdf
Additional Links: View publication in Scopus

Evolution of IFN subgroups in bony fish - 2. analysis of subgroup appearance and expansion in teleost fish with a focus on salmonids

2020

Liu, F., Wang, T., Petit, J., Forlenza, M., Chen, X., Chen, L., Zou, J., Secombes, C. J.

Fish & Shellfish Immunology, vol. 98, pp. 564-573

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2020.01.039
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15725/1/Liu_et_al_FSI_EvolutionOfIFNSubgroup.pdf
Additional Links: View publication in Scopus

Five subfamilies of β-defensin genes are present in salmonids: evolutionary insights and expression analysis in Atlantic salmon Salmo salar

2020

Harte, A., Tian, G., Xu, Q., Secombes, C. J., Wang, T.

Developmental and Comparative Immunology, vol. 104, 103560

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.dci.2019.103560
Additional Links: View publication in Scopus

Photoperiodic regulation in a wild-derived mouse strain

2020

Sáenz de Miera, C., Beymer, M., Routledge, K., Król, E., Selman, C., Hazlerigg, D. G., Simonneaux, V.

Journal of Experimental Biology, vol. 223, no. 6, jeb217687

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1242/jeb.217687
Additional Links: View publication in Scopus

Supplementation of arginine, ornithine and citrulline in rainbow trout (Oncorhynchus mykiss): Effects on growth, amino acid levels in plasma and gene expression responses in liver tissue

2020

Clark, T. C., Tinsley, J., Sigholt, T., Macqueen, D. J., Martin, S. A. M.

Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology, vol. 241, 110632

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.cbpa.2019.110632
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15463/1/Clark_etal_ComBiochem_AAM.pdf
Additional Links: View publication in Scopus

Expansion of fish CCL20_like chemokines by genome and local gene duplication: Characterisation and expression analysis of 10 CCL20_like chemokines in rainbow trout (Oncorhynchus mykiss)

2020

Liu, F., Wang, T., Hu, Y., Tian, G., Secombes, C. J., Wang, T.

Developmental and Comparative Immunology, vol. 103, 103502

Contributions to Journals: Articles

Online: http://www.sciencedirect.com/science/article/pii/S0145305X19303787
Digital Object Identifier: https://doi.org/10.1016/j.dci.2019.103502
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15173/1/Liu_etal_DevelopCompImm_AAM.pdf
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Identification, molecular characterization and functional analysis of interleukin (IL)-2 and IL-2like (IL-2L) cytokines in sea bass (Dicentrarchus labrax L.)

2020

Buonocore, F., Gerdol, M., Pallavicini, A., Stocchi, V., Randelli, E., Belardinelli, M. C., Miccoli, A., Saraceni, P. R., Secombes, C. J., Scapigliati, G., Wang, T.

Cytokine, vol. 126, 154898

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.cyto.2019.154898
Open Access: http://aura.abdn.ac.uk/bitstream/2164/15323/1/CYTO_Buonocore_et_al_Identification_molecular_characterization_AAM.pdf
Additional Links: View publication in Scopus

Evolution of IFN subgroups in bony fish - 1: Group I-III IFN exist in early ray-finned fish, with group II IFN subgroups present in the Holostean spotted gar, Lepisosteus oculatus

2019

Liu, F., Bols, N. C., Pham, P. H., Secombes, C. J., Zou, J.

Fish & Shellfish Immunology, vol. 95, pp. 163-170

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.10.032

Identification and characterization of three CXC chemokines in Asian swamp eel (Monopterus albus) uncover a third CXCL11_like group in fish

2019

Yuan, H., Li, Y., Han, P., Tian, G., Zhang, W., Guo, H., Xu, Q., Wang, T.

Developmental and Comparative Immunology, vol. 101, 103454

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.dci.2019.103454
Additional Links: View publication in Scopus; View publication in Mendeley

Induction of IL-22 protein and IL-22-producing cells in rainbow trout Oncorhynchus mykiss

2019

Hu, Y., Carpio, Y., Scott, C., Alnabulsi, A., Alnabulsi, A., Wang, T., Liu, F., Monte, M., Wang, T., Secombes, C.

Developmental and Comparative Immunology, vol. 101, 103449

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.dci.2019.103449
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19913/2/Hu_etal_DCI_Induction_of_IL22_VOR.pdf

Gene expression analysis of the innate immune system during early rearing and weaning of meagre (Argyrosomus regius)

2019

Campoverde, C., Milne, D. J., Secombes, C. J., Estévez, A., Gisbert, E., Andree, K. B.

Fish & Shellfish Immunology, vol. 94, pp. 819-832

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.10.009

Different origins of paralogues of salmonid TNR1 and TNFR2: characterisation and expression analysis of four TNF receptor genes in rainbow trout Oncorhynchus mykiss

2019

Hong, S., Wang, T., Secombes, C. J., Wang, T.

Developmental and Comparative Immunology, vol. 99, 103403

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.dci.2019.103403
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14390/1/Accepted_Manuscript_Different_origins_of_paralogues_of_salmonid_TNR1_and_TNFR2.pdf
Additional Links: View publication in Mendeley

An insight into piscidins: The discovery, modulation and bioactivity of greater amberjack, Seriola dumerili, piscidin

2019

Milne, D. J., Fernández-Montero, �., Gundappa, M. K., Wang, T., Acosta, F., Torrecillas, S., Montero, D., Zou, J., Sweetman, J., Secombes, C. J.

Molecular Immunology, vol. 114, pp. 378-388

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.molimm.2019.08.005
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14987/1/Milne_et_al_Mol_Imm_An_Insight_AAM.pdf

Distinct response of immune gene expression in peripheral blood leucocytes modulated by bacterin vaccine candidates in rainbow trout Oncorhynchus mykiss : A potential in vitro screening and batch testing system for vaccine development in aquaculture

2019

Attaya, A., Jiang, Y., Secombes, C. J., Wang, T.

Fish & Shellfish Immunology, vol. 93, pp. 631-640

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.08.002
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14833/1/Attaya_etal_PBL_bacterin_stimulation_AAM.pdf
Additional Links: View publication in Mendeley

Effects of temperature on amoebic gill disease development: Does it play a role?

2019

Benedicenti, O., Pottinger, T. G., Collins, C., Secombes, C. J.

Journal of Fish Diseases, vol. 42, no. 9, pp. 1241-1258

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1111/jfd.13047
Open Access: http://aura.abdn.ac.uk/bitstream/2164/14514/1/Accepted_Manuscript_Effects_of_temperature_on_amoebic_gill_disease_development_does_it_play_a_role.pdf; http://aura.abdn.ac.uk/bitstream/2164/14514/2/Figures.pdf
Additional Links: View publication in Scopus; View publication in Mendeley

Detection of interleukin (IL)-22 protein expression in rainbow trout (Oncorhynchus mykiss)

2019

Hu, Y., Wang, T., Carpio, Y., Scott, C., Wang, T., Liu, F., Monte, M., Alnabulsi, A., Secombes, C. J.

Fish & Shellfish Immunology, vol. 91, pp. 445

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.219
Additional Links: View publication in Mendeley

Formulation of A. salmonidda adjuvanted vaccine for rainbow trout: Impact of the adjuvant oil origin

2019

Veenstra, K., Ionkoff, G., Imbault, H., Versille, N., Ben Arous, J., Secombes, C. J.

Fish & Shellfish Immunology, vol. 91, pp. 452-453

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.241
Additional Links: View publication in Mendeley

From gross morphology to gill transcriptome in farmed Atlantic salmon (Salmo salar): Lessons from multi-site sampling

2019

Krol, E., Douglas, A., Noguera, P., Valdenegro, V., Gajardo, K., Bickerdike, R., Martin, S. A. M.

Fish & Shellfish Immunology, vol. 91, pp. 467

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.278
Additional Links: View publication in Mendeley

Gene encoding enzymes in the urea cycle and polyamine synthesis are modulated during an inflammatory response in rainbow trout (Oncorhynchus mykiss)

2019

Clark, T., Tinsley, J., Macqueen, D. J., Martin, S. A. M.

Fish & Shellfish Immunology, vol. 91, pp. 468

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.281
Additional Links: View publication in Mendeley

Impact of sea lice (Caligus rogercresseyi) infection levels on skin transcriptome in Atlantic salmon (Salmo salar)

2019

Zindrili, R., Krol, E., Mente, E., Douglas, A., Martin, S. A. M.

Fish & Shellfish Immunology, vol. 91, pp. 436-437

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.196
Additional Links: View publication in Mendeley

Long-term, proteome-scale analysis of rainbow trout immune proteins: Implications for aquaculture vaccine development

2019

Bakke, F. K., Monte, M. M., Causey, D., Cornulier, T., Douglas, A., Stead, D., Martin, S. A. M., Macqueen, D. J., Dooley, H.

Fish & Shellfish Immunology, vol. 91, pp. 453

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.242
Additional Links: View publication in Mendeley

Phylogeny and expression of the tetraspanin CD9 in salmonid cell lines in response to interferon stimulation

2019

Dehler, C. E., Boudinot, P., Collet, B., Martin, S. A. M.

Fish & Shellfish Immunology, vol. 91, pp. 433

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.186
Additional Links: View publication in Mendeley

Switching off the furnace: brown adipose tissue and lactation

2019

Król, E., Speakman, J. R.

Molecular Aspects of Medicine, vol. 68, pp. 18-41

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.mam.2019.06.003
Additional Links: View publication in Scopus; View publication in Mendeley

The transforming growth factor (TGF)-B family in rainbow trout (Oncorhynchus mykiss): Characterization and expression analysis

2019

Wang, T., Liu, F., Hu, Y., Secombes, C. J., Wang, T.

Fish & Shellfish Immunology, vol. 91, pp. 448

Contributions to Journals: Abstracts

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2019.04.228
Additional Links: View publication in Mendeley