BSc (Hons), MSc, PhD, AFHEA
Lecturer
- About
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- Email Address
- indrani.mukhopadhya@abdn.ac.uk
- Office Address
- School/Department
- School of Medicine, Medical Sciences and Nutrition
External Memberships
Member of the Microbiology Society
Member of the British Society of Immunology (BSI)
Member of the British Society of Gastroenterology (BSG)
Member of the UK Gut Microbiota for Health Expert Panel
STEM Ambassador
- Research
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Research Overview
- To underpin the role of the gut microbiota in health and disease.
- Elucidate host-pathogen interactions, pathogenic mechanisms, and immune response of enteric microbes.
- Investigate the mechanism by which gut viruses initiate chronic inflammation in the aetiopathogenesis of inflammatory bowel disease and other gastrointestinal diseases.
- Harness the power of gut microbes as novel therapeutic agents.
Research Areas
Accepting PhDs
I am currently accepting PhDs in Biomedical Sciences.
Please get in touch if you would like to discuss your research ideas further.
Biomedical Sciences
Accepting PhDsResearch Specialisms
- Microbiology
- Virology
- Immunology
- Molecular Biology
- Gastroenterology
Our research specialisms are based on the Higher Education Classification of Subjects (HECoS) which is HESA open data, published under the Creative Commons Attribution 4.0 International licence.
Knowledge Exchange
- Grampian Liver Research Patient Engagement Event -presentation on Gut Microbiota in liver disease, 2024
- Podcast on Next generation biotherapeutics 2023 Podcast link
- Institute of Medical Sciences, UoA, Doors open day, 2023
- University of Aberdeen May fest 2019, Fantastic Microbes and Where to Find Them.
- Café MED talk on IBD research aimed at a general audience, June 2018
- University of Aberdeen May fest 2017, Man vs Microbes Quiz, aimed to test and enhance public knowledge of microbiology and measures to stay safe from
- Filmed for a short video clip describing my ISSF project (2016), which is now hosted on the ISSF@Aberdeen university website and also on the college YouTube channel
Funding and Grants
- Laboratory start-up fund from Institute of Medical Sciences, UoA - Nov 2022
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Health Protection Scotland grant awarded in Feb 2019 for genotyping of representative rotavirus isolates post introduction of rotavirus vaccine in Scotland – PI
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Wellcome Trust ISSF @ Aberdeen fellowship support award, from October 2015 to March 2016, for the project titled “Role of the enteric virome and its interaction with the bacterial and fungal microbiome in the aetiopathogenesis of Crohn’s disease” – PI
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Health Protection Scotland grant awarded in March 2015 for genotyping of representative rotavirus isolates post introduction of rotavirus vaccine in Scotland – Co-PI
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NHS Grampian Endowment Funding Grant 2014/2015 for the project titled “Elucidating the Role of Non Jejuni/coli-Campylobacter in the Development of Colorectal Cancer Utilising Comparative Genomics to Study their Pathogenetic Potential” – PI
- Teaching
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Courses
Course coordinator
- Year 1 MBChB Immunology Problem-Solving Tutorial (ME2019)
Teaching Responsibilities
Undertake lectures, workshops, practicals, tutorials and assessments for microbiology and immunology courses at the University.
Non-course Teaching Responsibilities
- Supervising BSc Honours and MSc projects
- Personal Tutor for UoA students
- Placement Tutor for MSci students
- Publications
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Evidence of intrafamilial transmission of rotavirus in a birth cohort in South India
Journal of Medical Virology, vol. 80, no. 10, pp. 1858-63Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/jmv.21263
Polymerase chain reaction in the detection of an 'outbreak' of asymptomatic viral infections in a community birth cohort in south India
Epidemiology and Infection, vol. 136, no. 3, pp. 399-405Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1017/S0950268807008709
Molecular characterization of G11P[25] and G3P[3] human rotavirus strains associated with asymptomatic infection in South India
Journal of Medical Virology, vol. 79, no. 11, pp. 1768-74Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/jmv.20988
Modification of rotavirus multiplex RT-PCR for the detection of G12 strains based on characterization of emerging G12 rotavirus strains from South India
Journal of Medical Virology, vol. 79, no. 9, pp. 1413-21Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/jmv.20872
Human caliciviruses in symptomatic and asymptomatic infections in children in Vellore, South India
Journal of Medical Virology, vol. 79, no. 5, pp. 544-51Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/jmv.20862
Neonatal infection with G10P[11] rotavirus did not confer protection against subsequent rotavirus infection in a community cohort in Vellore, South India
The journal of infectious diseases, vol. 195, no. 5, pp. 625-32Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1086/510853
Geographic information systems and genotyping in identification of rotavirus G12 infections in residents of an urban slum with subsequent detection in hospitalized children: emergence of G12 genotype in South India
Journal of Clinical Microbiology, vol. 45, no. 2, pp. 432-7Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1128/JCM.01710-06
Efficacy and acceptability of chlorine dioxide water disinfectant
Indian journal of medical microbiology, vol. 25, no. 1, pp. 74-5Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.4103/0255-0857.31074
Comparative study of the epidemiology of rotavirus in children from a community-based birth cohort and a hospital in South India
Journal of Clinical Microbiology, vol. 44, no. 7, pp. 2468-74Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1128/JCM.01882-05
Multilocus genotyping of Cryptosporidium sp. isolates from human immunodeficiency virus-infected individuals in South India
Journal of Clinical Microbiology, vol. 44, no. 2, pp. 632-4Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1128/JCM.44.2.632-634.2006