BA Natural Sciences (Cantab. 1991), MA (Cantab. 1994), PhD (Edinburgh 1996)
Personal Chair
- About
-
- Email Address
- m.collinson@abdn.ac.uk
- Office Address
Room 4.37, Institute of Medical Sciences, Foresterhill, Aberdeen AB25 2ZD
- School/Department
- School of Medicine, Medical Sciences and Nutrition
Biography
J. Martin Collinson
Graduated in Natural Sciences (Genetics) from Fitzwilliam College, University of Cambridge, in 1991. Obtained a PhD at the University of Edinburgh, working in the MRC Human Genetics Unit studying the roles of homeobox gene family members (Msx genes) in vertebrate embryological development.
Postdoctoral positions at the University of Edinburgh 1996-2002, studying the roles of cell adhesion molecules (Neurofascin) and transcription factors (Pax6) in vertebrate development and disease.
Appointed Lecturer at Aberdeen University, 2002.
Senior Lecturer from October 2005. Reader 2008. Personal Chair 2012
Vice-chair of the Editorial Board of the journal British Birds.
Former Chair of the British Ornithologists’ Union Records Committee
FOR BIRD/DNA enquiries, contact m.collinson@abdn.ac.uk
External Memberships
MEMBERSHIP OF PROFESSIONAL ORGANISATIONS
- British Society for Developmental Biology
- Genetics Society
- Former Chair of the BOU records Committee and Convenor of the Taxonomic Committee
EDITORIAL BOARD MEMBERSHIP
- Ibis 2009 - present
- British Birds 1998 - present
- Research
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Research Overview
The major foci of work in the lab are:
THE GENETIC BASIS OF HUMAN BIRTH ABNORMALITIES AND DEGENERATIVE DISEASE
STEM CELL BIOLOGY IN HUMAN DEVELOPMENT AND DISEASE
We study the genetic basis of normal embryonic development (mostly eyes and limbs) and the processes that can go wrong in humans. We also study stem cell activity in adults, focusing on degenerative disease and fertility problems.
1) The development and evolution of eyes. There are several projects on the go.
a) The roles of a transcription factor, Pax6, in eye development and disease . We examine how mutations in Pax6 change the cell surface properties of mutant cells, and how this may impact on the eye.
Patients with mutations in the PAX6 gene develop multiple eye abnormalities, including any or all of: aniridia (absence of iris), corneal opacity (aniridia-related keratopathy), cataract (lens clouding), glaucoma and long-term retinal degeneration. We are interested in developing new therapeutic strategies
Figure 1: The eye of a PAX6+/- aniridic patient (photograph kindly provided by Dr K, Ramaesh, University of Edinburgh). Note the corneal opacity associated with vascularisation.
b) The development of eyes in true moles (Talpa). Moles live most of their lives underground and over evolutionary time we expect their eyes to degenerate. We study the Iberian Mole Talpa occidentalis, in which the eyes are permanently closed, and determine how the genetic pathways that underlie eye development are breaking down in this species.
Figure 2: An adult Iberian Mole
2) The genetic control of axon guidance and epithelial cell migration. What pushes a cell or a growth cone from point A to point B? We examine the relative contribution of chemical and contact mediated guidance cues in vivo.
Figure 3. Swirling patterns of cell migration in the corneal epithelium, visualised in eyes that are mosaic for LacZ expression.
3) The genetics and etiology of Congenital Talipes Equinovarus (clubfoot)
We study the genetic and environmental factors that underlie clubfoot - an extremely common birth abnormality (1 in 500 babies) for which virtually nothing is clear about the causes.
Figure 4. Human bilateral clubfoot.
28th August 2011 - Interview with the Naked Scientists about the clubfoot project - see
http://www.thenakedscientists.com/HTML/content/interviews/interview/1784/
POTENTIAL PHD STUDENT?
We are looking for motivated, funded PhD students for studies in any of the above fields, e.g.
1) Genetics and molecular biology of motor neurone development and disease
2) Eye Evolution
3) Control of cell migration and wound healing
4) Genetics of human disease
5) Adult Stem Cells
Research Areas
Biological and Environmental Sciences
Biomedical Sciences
Research Specialisms
- Genetics
Our research specialisms are based on the Higher Education Classification of Subjects (HECoS) which is HESA open data, published under the Creative Commons Attribution 4.0 International licence.
Funding and Grants
MRC Principal Applicant. The genetic basis of clubfoot. £515,000 from October 2008
BBSRC Principal Applicant – coholders Dr Ann Rajnicek (Univ of Aberdeen), Prof Min Zhao (UC Irvine), Prof Colin McCaig (Univ of Aberdeen) The genetic control of epithelial cell migration and wound healing physiology £643,000 from February 2007
WELLCOME TRUST Corneal dysgenesis in the Pax6-mutant mouse – shoddy workmanship or sabotage? £245,000 from 1/9/04.
Dr James Alexander Mearns Trust Molecular basis of gene dosage effects of Pax6 mutants £51,660 from 01/10/07.
NHS GRAMPIAN ENDOWMENT FUND Vascularisation of the cornea £2688 from 01/04/07
NEWLIFE (Birth Defects Foundation) Aetiology and therapy of congenital corneal opacity £80,000 from July 2005
- Teaching
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Teaching Responsibilities
TEACHING - BSc Programmes in Biomedical Sciences, Genetics, Human Embryology and Developmental Biology.
Human Embryology and Developmental Biology Degrees at the University of Aberdeen
The degrees are suitable for students wanting to learn about embryology, stem cells, bioengineering, reproductive biology, wound healing, evolution and cancer. Graduates can move on to jobs in academic and commercial jobs in embryology, clinical genetics, molecular biology and many biomedical fields.
'T-Club' - the Developmental Biology newsletter for University of Aberdeen.TClubDec12.pdf
Are you thinking about a degree in Developmental biology? Have a look at this.
- Publications
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Page 2 of 2 Results 51 to 97 of 97
Tissue specific characterisation of Lim-kinase 1 expression during mouse embryogenesis
Gene Expression Patterns, vol. 11, no. 3-4, pp. 221-232Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.gep.2010.12.003
A time-lapse and quantitative modelling analysis of neural stem cell motion in the absence of directional cues and in electric fields
Journal of neuroscience research, vol. 88, no. 15, pp. 3267-3274Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/jnr.22502
- [ONLINE] View publication in Scopus
Development of the cornea of true moles (Talpidae): Morphogenesis and expression of PAX6 and cytokeratins
Journal of Anatomy, vol. 217, no. 5, pp. 488-500Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1469-7580.2010.01299.x
- [ONLINE] View publication in Scopus
Retinal development and function in a 'blind' mole
Proceedings of the Royal Society of London. B, Biological Sciences, vol. 277, no. 1687, pp. 1513-1522Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1098/rspb.2009.1744
Cytoskeletal and cell adhesion defects in wounded and Pax6+/- corneal epithelia
Investigative Ophthalmology & Visual Science, vol. 51, no. 3, pp. 1415-1423Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1167/iovs.09-4023
Taxonomic recommendations for British birds: sixth report
Ibis, vol. 152, no. 1, pp. 180-186Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1474-919X.2009.00983.x
Effects of elevated Pax6 expression and genetic background on mouse eye development
Investigative Ophthalmology & Visual Science, vol. 50, no. 9, pp. 4045-4059Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1167/iovs.07-1630
The developmental basis of clubfoot
16th Annual Conference of the International-Society-of-Development-Biologists, pp. S126Contributions to Journals: Abstracts- [ONLINE] DOI: https://doi.org/10.1016/j.mod.2009.06.245
Control of patterns of corneal innervation by Pax6
Investigative Ophthalmology & Visual Science, vol. 50, no. 3, pp. 1122-1128Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1167/iovs.08-2812
The molecular basis of defective lens development in the Iberian mole
BMC Biology, vol. 6, 44Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1186/1741-7007-6-44
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/3683/1/The_molecular_basis.pdf
Taxonomic recommendations for British birds: fifth report
Ibis, vol. 150, no. 4, pp. 833-835Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1474-919X.2008.00875.x
Chronic wound state exacerbated by oxidative stress in Pax6+/-aniridia-related keratopathy
The Journal of pathology, vol. 215, no. 4, pp. 421-430Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/path.2371
Species boundaries in the Herring Gull and Lesser Black-Backed Gull complex
British Birds, vol. 101, no. 7, pp. 340-363Contributions to Journals: ArticlesPAX6 dosage effects on comeal development, growth, and wound healing
Developmental Dynamics, vol. 237, no. 5, pp. 1295-1306Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/dvdy.21528
Identification of vagrant Iberian Chiffchaffs - Pointers, pitfalls and problem birds
British Birds, vol. 101, no. 4, pp. 174-188Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Maternal smoking during pregnancy specifically reduces human fetal desert hedgehog gene expression during testis development
Journal of Clinical Endocrinology and Metabolism, vol. 93, no. 2, pp. 619-626Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1210/JC.2007-1860
A highly conserved Wnt-dependent TCF4 binding site within the proximal enhancer of the anti-myogenic Msx1 gene supports expression within Pax3-expressing limb bud muscle precursor cells
Developmental Biology, vol. 311, no. 2, pp. 665-678Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.ydbio.2007.07.022
Taxonomic recommendations for British birds: Fourth report
Ibis, vol. 149, no. 4, pp. 853-857Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1474-919X.2007.00758.x
Video analysis of the escape flight of Pileated Woodpecker Dryocopus pileatus: does the Ivory-Billed woodpecker Campephilus principalis persist in continental North America?
BMC Biology, vol. 5, 8Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1186/1741-7007-5-8
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/3685/1/Video_analysis.pdf
Cell surface glycoconjugate abnormalities and corneal epithelial wound healing in the Pax6(+/-) mouse model of aniridia-related keratopathy
Investigative Ophthalmology & Visual Science, vol. 47, no. 12, pp. 5276-5282Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1167/iovs.06-0581
Developing guidelines to assist in defining species limits
Acta Zoologica Sinica, vol. 52, no. 201, pp. 435-438Contributions to Journals: ArticlesPenetrance of eye defects in mice heterozygous for mutation of Gli3 is enhanced by heterozygous mutation of Pax6
BMC Biology, vol. 6, 46Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1186/1471-213X-6-46
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/3682/1/Penetrance_of_eye.pdf
The roles of calcium signaling and ERK1/2 phosphorylation in a Pax6(+/-) mouse model of epithelial wound-healing delay
BMC Biology, vol. 4, 27Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1186/1741-7007-4-27
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstream/2164/3684/1/The_roles_of_calcium.pdf
Identification of novel mutant PAX6 alleles in Indian cases of familial aniridia
BMC Ophthalmology, vol. 6, 28Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1186/1471-2415-6-28
- [ONLINE] View publication in Scopus
Species limits within the genus Melanitta, the scoters
British Birds, vol. 99, no. 4, pp. 183-201Contributions to Journals: ArticlesTaxonomy for birders: A beginner's guide to DNA and species problems
British Birds, vol. 98, no. 10, pp. 512-537Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Developmental and cellular factors underlying corneal epithelial dysgenesis in the Pax6+/- mouse model of aniridia
Experimental Eye Research, vol. 81, no. 2, pp. 224-235Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.exer.2005.02.002
Species limits in the Red-Breasted Flycatcher
British Birds, vol. 98, no. 10, pp. 538-541Contributions to Journals: ArticlesTaxonomic recommendations for British birds: third report
Ibis, vol. 147, pp. 821-826Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1474-919x.2005.00483.x
Is there a functional link between gene interdigitation and multi-species conservation of synteny blocks?
BioEssays, vol. 26, no. 11, pp. 1217-1224Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/bies.20117
Species limits in Acrocephalus and Hippolais warblers from the Western Palearctic
British Birds, vol. 97, no. 6, pp. 276-299Contributions to Journals: Articles- [ONLINE] View publication in Scopus
The taxonomic status of Macqueen's Bustard
British Birds, vol. 97, no. 2, pp. 60-67Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Analysis of eye development with mouse chimeras and mosaics
International Journal of Developmental Biology, vol. 48, pp. 793-804Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1387/ijdb.041885jc
Corneal development, limbal stem cell function, and corneal epithelial cell migration in the Pax6+/- mouse
Investigative Ophthalmology & Visual Science, vol. 45, no. 4, pp. 1101-1108Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1167/iovs.03-1118
De-novo deletions in the paired domain of PAX6 in south Indian aniridic patients
Journal of Human Genetics, vol. 49, pp. 647-649Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s10038-004-0200-1
Taxonomic recommendations for British birds: second report
Ibis, vol. 146, no. 1, pp. 153-157Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/j.1474-919X.2004.00268.x
Specific status of taxa within the Greenish Warbler complex
British Birds, vol. 96, no. 7, pp. 327-331Contributions to Journals: Articles- [ONLINE] View publication in Scopus
The taxonomic status of Carrion and Hooded Crows
British Birds, vol. 96, no. 6, pp. 274-290Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Corneal abnormalities in Pax6+/- (small eye) mice mimic human aniridia-related keratopathy
Investigative Ophthalmology & Visual Science, vol. 44, no. 5, pp. 1871-1878Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1167/iovs.02-0576
The roles of Pax6 in the cornea, retina and olfactory epithelium of the developing mouse embryo
Developmental Biology, vol. 255, no. 2, pp. 303-312Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/S0012-1606(02)00095-7
Pax6 regulates regional development and neuronal migration in the cerebral cortex
Developmental Biology, vol. 255, no. 1, pp. 151-163Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/S0012-1606(02)00046-5
The specific status of Balearic and Yelkouan shearwaters
British Birds, vol. 95, no. 12, pp. 636-639Contributions to Journals: Articles- [ONLINE] View publication in Scopus
Clonal analysis of patterns of growth, stem cell activity and cell movement during the development and maintenance of the murine corneal epithelium
Developmental Dynamics, vol. 224, no. 4, pp. 432-440Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/dvdy.10124
Guidelines for assigning species rank
Ibis, vol. 144, no. 3, pp. 518-525Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1046/j.1474-919X.2002.00091.x
Taxonomic recommendations for British birds
Ibis, vol. 144, no. 4, pp. 707-710Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1046/j.1474-919X.2002.00110.x
Primary defects in the lens underlie complex anterior segment abnormalities of the Pax6 heterozygous eye
PNAS, vol. 98, no. 17, pp. 9688-9693Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1073/pnas.161144098
Two enhancer domains control early aspects of the complex expression pattern of Msx1
Mechanisms of Development, vol. 62, no. 1, pp. 29-40Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/S0925-4773(96)00646-6